Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3225 ATGAAACTCATCCTCCACTTTCTCTTCATTTTCATTTTCTCTCTTTTCAATCAACACTGCTGCTGCTTCCACGCGCTTTCTCGCTCACCAACATCACGCTCCATTCTCTCTCTTCCTCCTCCTCCTCCTCCTAAGGAAGAAACAACACTGATTGCCACACTAGATGGGACCATGTATTTGGTGGCCAACCACAAGAATGGTTCCAGGAGGGTATTATGGTCATTGCCCACAGGATCGCCGATCTACAGTTCGTATCAAGCTTCTACTAATAAGGACCATGGTACTGGAAATGCATCTGTAGCACCAGTTAGTGGGTTCGTGGAGTGTGGGGATGATTGGTCATTGTACATGCACGACAAGTACTCTGGTAAAAAAATGAGAATCTCAGAATCCATTGCAGAGTTTGTACTTCGTACACCTGCAATTTCAGATGATGGAGCAGTTATACTTGGATCCAAAGAAATCACTTTGTTTGTAGTTGACGCTAAAACTGGGTCGATCATTCAAATCCATGCCAAGTCTGATCCGGATAATGCTTCGGCACCTTTAAGTGATGAAAAGCAGAGCGCTAGAAGTATCACCAGTACAGATAATAACGATCTTGCTGATCGTGAGAAGCTAAATTCATCAGAGCCGCTGCTCAAGATTTTCAGGACAGATTATTCTCTGAAGTCTGTTAGCCCCAGCTCGGGAATAGTACTGTGGAATTTGACAGTAGCTAAATTTGAGGCTGTATTATTATGCCAACATACTACATTTGATGTAGAGGATAAAAACCTTTCTGTTAGTGGCCTCAATTTTACGATGCCTTGTGAAGAGATGCAAAATGTCTTTCGCGTGAAAAGTTCACATGGGGCTTATCATGGAAATGATATACTCTCAATGACTTCATCAGATATGATGATTACATTACAGCCTAATATTTATAGATTTTTCGATGGTGATAATATGATGATTCTTCCTATGCCTTTGCCACATTCTATGCCTTTTCTACAACAAAATAATGATAAGGAAGATAAACTCCTTCAACCTCTCATTGAAATTACTTCACCAGGTGACATTTATTTGAACAAGAAGAGTGGATGGTCAACTCCATTACGTAGTATATTGTTTACGGTCTTTCTTCTGGTGTTGGGCTTTTCAATCATCTACTTTCGTCTGGTGAAGGTGATTAAGAATGAAGATATACCAAAGGACCAAAATAGAGAGTATGAATTGAAAAGTTCATCTTCTAAGAGAAAGAGGTCACACAAGTTAGGAAGGAACAATGGCACTACAGATAAAATGGAAAAACATCTTTCTTCAGAAGAAGATGCACAGACACGAAAAGATAATAACAGAGAAGTATGGCAGAACTTTAATCAAGTTGATGAAGGTGTTGATGGACGACGAATTGGTAAATTGTTTGTTTCAAATAAAGAGATTGCTATGGGAAGCAATGGTACGATTGTCCTTGATGGAAAATATGAAGGCCGACCAGTTGCAATCAAGCGGCTTGTCAAAGCTCATCACAATGTAGCCTACAAAGAAATCCAAAACCTTATTGTGTCTGACCGTCATCCAAACATTGTCCGATGGCATGGGGTGGAGGATGATCAAGATTTTATTTACCTTGCACTAGAACGTTGTACTTGCAACTTAAATGATTTAATTCAAATTTATTCAGGTACATCAGAAAATTCTGGTTTTAGAAAGGACCAAGCATTCATATGTTTGATAAAAGGCCAAATGGAGACAGGGAAGGATACTGCACAATATCTTTGGAAACAAAATGGCTGTCCATCACCTCTACTATTGAAACTGATGAGGGATATTGTTGCTGGGGTTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTATTAATCAAGGAAAGATCCTTATGTGCAAAGCTTTCTGACATGGGCATTAGCAAACGTCTTCTTGATAACATGTCCTCTTTGGGTCATAATGCTACTGGTGGGGGCAGTTCAGGTTGGCAAGCCCCAGAGCAGCTTGCTCAAGGACGCCAAACACGAGCTGTAGATATATTCAGTTTAGGTTGTATTCTTTTTTTCTGTATTACCGGAGGAAGACATCCATTTGGACAACATCTTGAACGTGATATCAATATTGTGAACAATCGAAAGAATCTTTTCTTAGTGCAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGAACCTAATTTAAGGCCGAAAGCGACTGAAGTGTTGCAGCATCCTTTTTTCTGGAATTCCGAGACAAGACTTTCATTTTTACGTGACACCAGCGACAGGGTAGAATTGGAAGATAGAAATCTTAGTTCTAATCTTTTGAGGGCGTTAGAAAGCATTGCCACAACGGCTTTAGGCGGTAAATGGGATGAAAAGATGGAACCAGCTTTCATTGTTAATATTGGTCGTTACCGGCGTTATAAGTTTAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATGGAGAATTGCCTCAAGAAATCCAGGAACTAGTTGGACCTGTTCCTGAAGGATTCAACGACTACTTTGCGAACCGGTTCCCAAGACTCTTGATTGAAGTGTATAATGTTATATGCAAGCATTGCAAGGAGGAAGAGTGTTTTCAAAGGTATTTTAAAAATGATGATTAA 2676 0.3965 MKLILHFLFIFIFSLFNQHCCCFHALSRSPTSRSILSLPPPPPPKEETTLIATLDGTMYLVANHKNGSRRVLWSLPTGSPIYSSYQASTNKDHGTGNASVAPVSGFVECGDDWSLYMHDKYSGKKMRISESIAEFVLRTPAISDDGAVILGSKEITLFVVDAKTGSIIQIHAKSDPDNASAPLSDEKQSARSITSTDNNDLADREKLNSSEPLLKIFRTDYSLKSVSPSSGIVLWNLTVAKFEAVLLCQHTTFDVEDKNLSVSGLNFTMPCEEMQNVFRVKSSHGAYHGNDILSMTSSDMMITLQPNIYRFFDGDNMMILPMPLPHSMPFLQQNNDKEDKLLQPLIEITSPGDIYLNKKSGWSTPLRSILFTVFLLVLGFSIIYFRLVKVIKNEDIPKDQNREYELKSSSSKRKRSHKLGRNNGTTDKMEKHLSSEEDAQTRKDNNREVWQNFNQVDEGVDGRRIGKLFVSNKEIAMGSNGTIVLDGKYEGRPVAIKRLVKAHHNVAYKEIQNLIVSDRHPNIVRWHGVEDDQDFIYLALERCTCNLNDLIQIYSGTSENSGFRKDQAFICLIKGQMETGKDTAQYLWKQNGCPSPLLLKLMRDIVAGVVHLHELGIIHRDLKPQNVLLIKERSLCAKLSDMGISKRLLDNMSSLGHNATGGGSSGWQAPEQLAQGRQTRAVDIFSLGCILFFCITGGRHPFGQHLERDINIVNNRKNLFLVQFIPEAEDLISCLLNPEPNLRPKATEVLQHPFFWNSETRLSFLRDTSDRVELEDRNLSSNLLRALESIATTALGGKWDEKMEPAFIVNIGRYRRYKFNSVRDLLRVMRNKLNHYGELPQEIQELVGPVPEGFNDYFANRFPRLLIEVYNVICKHCKEEECFQRYFKNDD* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3225 891 PANTHER IRE1-RELATED 6 887 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mal5g3225 891 MobiDBLite consensus disorder prediction 402 447 - -
Mal5g3225 891 MobiDBLite consensus disorder prediction 181 197 - -
Mal5g3225 891 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 6 887 - -
Mal5g3225 891 Gene3D Transferase(Phosphotransferase) domain 1 582 757 - -
Mal5g3225 891 MobiDBLite consensus disorder prediction 176 204 - -
Mal5g3225 891 ProSiteProfiles Protein kinase domain profile. 469 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3225 891 ProSiteProfiles KEN domain profile. 758 889 IPR010513 GO:0004540|GO:0006397
Mal5g3225 891 Gene3D KEN domain 758 891 IPR038357 -
Mal5g3225 891 MobiDBLite consensus disorder prediction 420 445 - -
Mal5g3225 891 SMART serkin_6 469 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3225 891 Pfam Ribonuclease 2-5A 761 887 IPR010513 GO:0004540|GO:0006397
Mal5g3225 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mal5g3225 891 Gene3D Phosphorylase Kinase; domain 1 456 541 - -
Mal5g3225 891 CDD RNase_Ire1 759 887 - -
Mal5g3225 891 Gene3D - 41 297 IPR015943 GO:0005515
Mal5g3225 891 SMART PGNneu 820 874 - -
Mal5g3225 891 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 52 184 IPR011047 -
Mal5g3225 891 SUPERFAMILY Protein kinase-like (PK-like) 464 781 IPR011009 -
Mal5g3225 891 Pfam Protein kinase domain 471 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3225 Mal-Chr5 94565362 94573961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3225 495 754 MAP Kinase Kinase Kinase AT3G06030 28.030 3.57e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mal5g3225 Pkinase 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3225 K08852 - gmx:100788389 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0882 6 13202698 13208448 Mal5g3225 5 94565362 94573961 PCT