Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3217 ATGTCTATTGAGACCATTGATCTTACTAACACCCCTGACTCTCCTCCATCATCACCCATATCTTTATCTAATGTACCAACAATCTTTAATTTTGGTCCAGTTTCTACCAACCCTAATCTTCACCAGCATATTCATTACCACAACCACCAAACTACTTTGTTGATACCACCACATCCAGGATTTGAGACCCCTCAAATCGCTACCAGTTGGCCCCAACCCAACATGCATCACAACCAAGTTATGACGGTTTTCAAACCGTTACCTGAATCAAACACATTCCATTTCTCATATGGAGTGAGGCCTATGGTTCCTTGGACTCAATTAGAGCATGACTTATTTCTCATGGGGCTAATTGAGTATGGAAAAGGGAAATGGAGCAAAATTGCTAAGCACTATGTATGCAACAAGACTCCACAACAAGTTCAAAGCTATGCTACCAACTTCTTCAAGCACCTACCAGTCGCATCTATGCATGCAGGTTTTAGGAAAAGTAAACTAGTTTCAAATCCCAACTACTTTGTTTCTAATGATCCTGCAAAGGAAACTCTCACTCTTCTAGAGATACCTCCTTTTTACTACAATGCTCCAACATATTATGGAGGAGAAGCTAGCAGCAGCAACAACACCAACAACTATGGAGCAAGCACTTCCATGACTTTGCCTAGTGCTTCTGGCCAAGGAGAAGTTGATTTGGAACTTCGTTTGGGTTTAAATTAA 717 0.41 MSIETIDLTNTPDSPPSSPISLSNVPTIFNFGPVSTNPNLHQHIHYHNHQTTLLIPPHPGFETPQIATSWPQPNMHHNQVMTVFKPLPESNTFHFSYGVRPMVPWTQLEHDLFLMGLIEYGKGKWSKIAKHYVCNKTPQQVQSYATNFFKHLPVASMHAGFRKSKLVSNPNYFVSNDPAKETLTLLEIPPFYYNAPTYYGGEASSSNNTNNYGASTSMTLPSASGQGEVDLELRLGLN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3217 238 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 13 236 - -
Mal5g3217 238 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 13 236 - -
Mal5g3217 238 CDD SANT 104 149 IPR001005 -
Mal5g3217 238 ProSiteProfiles Myb-like domain profile. 104 149 IPR001005 -
Mal5g3217 238 Pfam Myb-like DNA-binding domain 104 147 IPR001005 -
Mal5g3217 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 102 151 IPR006447 GO:0003677
Mal5g3217 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 153 IPR017930 -
Mal5g3217 238 SMART sant 101 151 IPR001005 -
Mal5g3217 238 ProSiteProfiles SANT domain profile. 100 153 IPR017884 -
Mal5g3217 238 SUPERFAMILY Homeodomain-like 104 152 IPR009057 -
Mal5g3217 238 Gene3D - 103 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3217 Mal-Chr5 94452419 94453684 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g3217 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3217 - - mtr:MTR_8g073050 280.026