Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3216 ATGTCTATTGAAATCATTGATCTTACTAACACCCCTGACTCCCCTCCATCATCACCCATATCTTTATCTAATGTACCAACAATCCTTAATTTTGGTCCAATTTCTACCAACCCTAATCTTCACCAGCATATTCATCACCACAACCACCAAACTACTTTGTTGGTACCACCACCTCCAGGATTTGAGACCCCTCAAATCGCTACCAGTTGGCCCCAACCCAACATGCATCACAACCAAGTTACGACGGTTCTCAAACCGTTATCGGAACCAAACACATTCCAATTCTCATATGGAGCGAGACCTAGGGTTCCTTGGACTCAATTAGAGCATGACTTATTTGTGATGGGGCTGATGGAGTATGGAAAAGGGAAATGGAGCAAAATTGCTAAGCACTTTGTATGCAACAAGACTCCACAACAAGTTCAAAGCTATGCTACTAACTTCTTCAAGCGCCTACCAGTCGCATCTATGCATGCAGGTTTTAGGAAAAGGAAACTAGTTGCAAATCCCAACTACTCTGCTTCTAATGATCCTGCAAAGGAAACTCTCACTCTTCTTCCAGAGATACCTCCTTTTTACTACAATGCTCCAACATATTATGGAGGAGAAGCTAGCAGCAGCAACACCACCAACAACTATGGAGCAAGCACTTCCATGACTCTGCCTAGTGCTTCTGGCCAAGGAGAAGTTGATTTGGAACTTCGTTTGGGTTTAAATTAA 720 0.4306 MSIEIIDLTNTPDSPPSSPISLSNVPTILNFGPISTNPNLHQHIHHHNHQTTLLVPPPPGFETPQIATSWPQPNMHHNQVTTVLKPLSEPNTFQFSYGARPRVPWTQLEHDLFVMGLMEYGKGKWSKIAKHFVCNKTPQQVQSYATNFFKRLPVASMHAGFRKRKLVANPNYSASNDPAKETLTLLPEIPPFYYNAPTYYGGEASSSNTTNNYGASTSMTLPSASGQGEVDLELRLGLN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3216 239 CDD SANT 104 149 IPR001005 -
Mal5g3216 239 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 151 IPR006447 GO:0003677
Mal5g3216 239 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 13 237 - -
Mal5g3216 239 SUPERFAMILY Homeodomain-like 100 151 IPR009057 -
Mal5g3216 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Mal5g3216 239 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 13 237 - -
Mal5g3216 239 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Mal5g3216 239 Gene3D - 103 153 - -
Mal5g3216 239 ProSiteProfiles Myb-like domain profile. 102 149 IPR001005 -
Mal5g3216 239 SMART sant 101 151 IPR001005 -
Mal5g3216 239 ProSiteProfiles SANT domain profile. 105 153 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3216 Mal-Chr5 94445346 94446681 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g3216 Myb_DNA-binding 4.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3216 - - mtr:MTR_8g073050 279.641