Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3214 ATGTCTAATGAGATCATTGATTTTACAAACTTCCCTAACACCCGTCGATCACCACCCATATCTTCATCTAATGCACCAATGGTCCTTAATTTTGGTCTCTTTTCTACCAATCCTAATCTTCACAACCATGTCCAACATCACCAACACCAAACTACTTTGTCGGTACCAGCAGCTCCAGGACACACCTATGAGACCCCTCAAATCACTACCAGTTGGCTCCAACCGGGTGTTCAAGGTGGTAGCCTAGTTGCGAGGGTTCTTCGACCGTTACCTGAACCAAACAACTTCCCATTCCCAAATGGATCTAGGCGCAGTGTGCCTTGGAGTCAATCAGAGCATGACTTATTTTTGATGGGGCTGATTAAGTATGGAAAGGGGAATTGGAGCAAAATTGCTAAGCACTTTGTATGCAATAAGACAAGACAACAAGTTCAAAGCTATGCTACTAGCTTCTTCAAGAACCTACCAGACACATATGTTCATGGTTTTAAGAAAAGGAAACTAATTCCAAATCCCTACTCTGCTTCCAACATATACAATGTTCTTGCAAAGGATACTCTCACTCTTTTTCCAGAGAAAACTCCCTTTAATTACAACAAAGCTCCGACATATTATGGAGGAGAAGCTAGCAGCAGCAACACCACCAACAATTATGAAGCAAGCACTTCCATGAATCTGCCTAGTGCTTCTGGTGGTGATGAAGAAGTTGATTTGGAACTTCGTTTGGGTTTAAATTAG 738 0.4214 MSNEIIDFTNFPNTRRSPPISSSNAPMVLNFGLFSTNPNLHNHVQHHQHQTTLSVPAAPGHTYETPQITTSWLQPGVQGGSLVARVLRPLPEPNNFPFPNGSRRSVPWSQSEHDLFLMGLIKYGKGNWSKIAKHFVCNKTRQQVQSYATSFFKNLPDTYVHGFKKRKLIPNPYSASNIYNVLAKDTLTLFPEKTPFNYNKAPTYYGGEASSSNTTNNYEASTSMNLPSASGGDEEVDLELRLGLN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3214 245 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g3214 245 ProSiteProfiles SANT domain profile. 103 156 IPR017884 -
Mal5g3214 245 SUPERFAMILY Homeodomain-like 107 155 IPR009057 -
Mal5g3214 245 Gene3D - 106 157 - -
Mal5g3214 245 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 14 243 - -
Mal5g3214 245 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 153 IPR006447 GO:0003677
Mal5g3214 245 CDD SANT 107 152 IPR001005 -
Mal5g3214 245 MobiDBLite consensus disorder prediction 209 229 - -
Mal5g3214 245 MobiDBLite consensus disorder prediction 209 234 - -
Mal5g3214 245 SMART sant 104 154 IPR001005 -
Mal5g3214 245 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Mal5g3214 245 Pfam Myb-like DNA-binding domain 106 147 IPR001005 -
Mal5g3214 245 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 14 243 - -
Mal5g3214 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 156 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3214 Mal-Chr5 94386328 94387769 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g3214 Myb_DNA-binding 1.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3214 - - mtr:MTR_8g072990 246.128