Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3173 ATGGAGAGTTCAAGAATCATTCCATGGTTAAACACTCTACTATGTGCCCTGCTATTACTAAAGACACAAGGACAGTATGTTCCACTGACTCGGCTCGATAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCCCCTGCTTACCATTTTGATGAAGGACATGATGAAGGAGTTAACAATTGGATTGTTCACATTGAGGGAGGTGGATGGTGCCACAATGTCACGTATTGCCTTTATCGGAAGGACAGTCGATTAGGTTCGTCGCATGAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGACAACCAAGGATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGATCATCATTTACCGGTGATGTTGAAGAAGTTGATCCAACGACGAATTTATACTACAGAGGAGCAAGGATTTTTTCTGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATTCTTTCTGGATGTTCTGCTGGAGGATTAACTACTATATTACACTGTGATGGATTTAGAGCACTATTTCCAAATGAAACTAGAGTAAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAATGATATCTCAGGAGATCATTACATTGAAGATTACTACAGTCAAGTTGTTGCAACACATGGTTCAGAAAAGAATTTGCCTTCATCCTGCACTTCAATGCTCAGTCCAGGACTTTGCTTTTTCCCACAATATATGGCATCAAGTATACAAACACCAATCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGATGCTGATCCTAACGGCCAATGGCGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGAACACAATTCTTAGAGGCATTGAGTCCTATAAGCAACTCTCCATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCGCAGGAAACATGGTTTAAAAGTGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAGGCAGTAGGAGACTGGTTTTATGAAAGAAGTCCATCCCGTGAGATAGATTGCACTTACCCTTGCAACCCTACTTGTCAGAACCGTGTTTGGGATGCAGCATCATACCCATCAATGTACTCTAGATTATTCTAA 1215 0.4008 MESSRIIPWLNTLLCALLLLKTQGQYVPLTRLDSAVSKGAVCLDGSPPAYHFDEGHDEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSHEMEEQTYFSGYLSDNQGYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPTTNLYYRGARIFSAVMEELLAKGMDHAENAILSGCSAGGLTTILHCDGFRALFPNETRVKCVSDAGYFVNVNDISGDHYIEDYYSQVVATHGSEKNLPSSCTSMLSPGLCFFPQYMASSIQTPIFIVNAAYDSWQIKNILAPGDADPNGQWRSCKTNLNNCSPEQLNIMQDYRTQFLEALSPISNSPSNGMFIDSCYVHCQTEPQETWFKSDSPMVGNKTVAKAVGDWFYERSPSREIDCTYPCNPTCQNRVWDAASYPSMYSRLF* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3173 404 PANTHER PECTIN ACETYLESTERASE 4 395 - -
Mal5g3173 404 SUPERFAMILY alpha/beta-Hydrolases 59 272 IPR029058 -
Mal5g3173 404 PANTHER NOTUM-RELATED 4 395 IPR004963 GO:0016787
Mal5g3173 404 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3173 Mal-Chr5 92680940 92684289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3173 5 399 Carbohydrate Esterase AT4G19420 55.116 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3173 K19882 - gmx:100780707 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3173 5 92680940 92684289 Mal5g3173 5 92680940 92684289 ECH
Mal5g3173 5 92680940 92684289 Mal6g0776 6 11400455 11406824 PCT