Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3172 ATGAAGTGTATAAGAATGGACCAATTGTTAAGTCTTGTAATATGTACACTGCTATTACTAAAGGCAGCAGAAGGTGTTACTGTGCCAATCACTTATGTTCAAAGTGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGCTGGAATTGACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGCCACAACTTGCCTTGACCGTAGGGACACACGTTTAGGATCATCGAAGAAAATGGATAAAACACTTTCCTTTTCGGGATTTTTTAGTAACGGCAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGTTCATCATTTACCGGCGATGTTGAAGCTGTCAATCCAGCAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTCAAAACTTTACTACCTGCAGCAACTAAAGTAAAATGTGTCTCAGATGCTGGTTACTTTATCAATGTAAAGGCTGTCTCTGGAGCACAACACATCGAACAATTCTACAGTCAAGTTGTTCAAACACATGGTTCAGCAAAGAATTTGCCTTCATCTTGTACGTCAAGACTCTCACCAGGGCTGTGTTTTTTCCCACAAAACGTGGCCGCACAAATCAGTACCCCAATCTTCTTTGTCAATGCAGCCTATGATTCATGGCAGATTAAGAACATTTTGGCACCAGGTGTTGCTGATCCTCATGGCACTTGGCGTAACTGCAAGCTTGATATAAAAAGCTGCTCACCTACTCAATTAAGTACAATGCAAGGTTTCAGGACAGATTTTTTAAAGGCTATTAGTGTGGTTAGTAATTCTCCATCTAAAGGAATGTTTATAGATGGTTGCTATTCCCACTGTCAAACCGGAATGCAGGAAACATGGATGAGAACCGACTCTCCGGTGCTGGCCAATACAACAATAGCAAAGGCTGTAGGAGATTGGTATTATGAGAGAAAGACTTTTCATCAGATAGATTGTCCTTACCCTTGCAACCCTACTTGTCATAACCGTGTTTTTGAATAA 1182 0.4036 MKCIRMDQLLSLVICTLLLLKAAEGVTVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEAGIDNWIVHFEGGGWCNNATTCLDRRDTRLGSSKKMDKTLSFSGFFSNGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPATNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAATKVKCVSDAGYFINVKAVSGAQHIEQFYSQVVQTHGSAKNLPSSCTSRLSPGLCFFPQNVAAQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDIKSCSPTQLSTMQGFRTDFLKAISVVSNSPSKGMFIDGCYSHCQTGMQETWMRTDSPVLANTTIAKAVGDWYYERKTFHQIDCPYPCNPTCHNRVFE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3172 393 PANTHER PECTIN ACETYLESTERASE 4 392 - -
Mal5g3172 393 Pfam Pectinacetylesterase 23 373 IPR004963 GO:0016787
Mal5g3172 393 PANTHER NOTUM-RELATED 4 392 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3172 Mal-Chr5 92659652 92664795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3172 5 392 Carbohydrate Esterase AT4G19420 58.629 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3172 K19882 - gmx:100781246 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0776 6 11400455 11406824 Mal5g3172 5 92659652 92664795 PCT