Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3163 ATGGAATCATCGAGTGAGAGAGAGTTTCGTGTAAATGGAAGCTGCATCAAGACAGCCGAAGTTGAAGCTAAGCTTGATCAAGGAAATATTCAAGATGCCGAAACCGCATTGCGTGATGGTTTATCTCTTAGTTCTGAGGAAGCAAGCGCTCTACTCGGAAAATTAGAGTATCAAAGAGGTAATGTTGAAGGCGCTCTTCGTGTGTTTGATGGGATTGATCTTAAAGCAGCCATACAGCGACTGCAACCTTCGCTTTCAGAAAAGCCACCCGTCAAAAAAGGTCCTCCTCGTGCCGAATCACCTTCTTCAGTAACTCAGCATGCTGCTAGTATGGTGCTCGAAGCCATCTACCTAAAAGCCAAGTCTCTACAAAAACTGGGGAAATTTAATGAAGCTGCTAATGAATGCAAGCAAGTTCTTGATGCTGTTGAGAAGGTGTTTTGTCAGGGTATACCTGATACTCAAGTGGATAATAAACTGCAGGAGATTGTAAGCTGTGCAGTAGAGCTCTTTCCTGAGCTTTGGAAACAAGCCGGTTGCTATCATGAGGCAATAACCGCTTATAGGAACGCCCTTCTCAGTCAATGGAATCTTGATAATGACTGCTGTGCGAGAATTCAGAAAGCGTTTGCCGTATTTTTGCTATACAGTGGTGTAGAGGCGAGTCCGCCAAGTTTTTCAGTTCAGACTGAGGGGTCTTATGTACCTAAGAATAATCTCGAAGAGGCAATTCTTCTTCTTATGATTGTTTTAAGGAAGTTTAGCCTAGGTAAGATAAAATATGATCCTTCAGTTATGGAACACCTAACTTTTGCACTTTCAGCATGTGGCGAAACTTCTATTTTGGCGAAGCAATTTGAAGAGATGCTTCCTGGTGTATATCATCGTATTGATCGTTGGAATTCTTTAGCTCTATGTCTTAGTGGAGCTGGACAAAGTAAAAGTGCTTTGAATCTGCTACGGAAGTCTTTGCACAAACATGAAAGACCAGATGACTTGATAGCGTTATTATTGGCTGCGAGGATTTGCAGTGAGGATCCTCATCTTTCTGCGGAGGGTGCAGGATATGCACAGAGGGCAATCGATAAAGCTCAGGGCTTAAACGAGCATTTGAAAGGTGTTGGTCTTCGGATGCTCGGACTTTGCCTTGGAAAGCAAGCTAAGGTTGCTTCCTCTGATTTCGAGAGGTCCATGCTTCAGTCAAAAGCTTTGCAATCATTGGAGGAGGCAGTTAGATTAGAGCAAAACAATTTTGATCTAATTTTTGAACTGGCTATTCAATATGCCGAGCACCGAAATTTGGCGGTTGCTTTACGTTATGCGAAGCAGTTCTTCGACAAAACTGGTGGCTCTAAATTGAAAGGTTGGAAATTGCTTTCTCTGGTTTTGTCTGCACAGAAAAGATTTTCAGAGGCTGAAGTGGTGACTGATGCTGCTTTAGATGAGACCGCAAAATGGGAGCAGGGGCCTTTGTTCAGGATAAAAGCCCAGCTGAAGATCGCCGAATTACGACCAATGGATGCTATTGAGATTTACCGGTACCTTCTTGCACTAGTTCAAGCCCAAAAGAAATCTGCTGGACCTCAAAAACTTAGTTCACAGGACGAGGAGGATCAAATAAATGAGTTTGATGTTTGGCATGGTCTAGCAAATTTATATGCAAGCCTTTCACATTGGAAGGATGCGGAAATCTGTTTGCAAAAGGCTAGAGAGTTGAAGGAATACTCGGCAGCAACAATACAAACTGAAGGTGTTGTGTTTGACGGTCGTGGACAAAACGATGAAGCTGTTGCAGCTGCTGTTAATGCTGTCCTAGTTGAACCAAACCATGTTCCAAGCAAGATCTTGATGGGTTCTTTGATGCTGAAAAATGGTTCCAAAGCATTACCTGTTTCTAGGAGTTTACTTTCTGATGCACTTAGAATAGAACCAACTAACCGCAATGCTTGGTATCATCTCGGGTTAACTCACAAGGATGACGGTCGAATGGGTGATGCTGCTGATTGCTTTCAGGCAGCTTCAATGCTTGAAGAATCTGATCCCATTGAAAGTTTTAGCTGTATGCTTTGA 2070 0.4295 MESSSEREFRVNGSCIKTAEVEAKLDQGNIQDAETALRDGLSLSSEEASALLGKLEYQRGNVEGALRVFDGIDLKAAIQRLQPSLSEKPPVKKGPPRAESPSSVTQHAASMVLEAIYLKAKSLQKLGKFNEAANECKQVLDAVEKVFCQGIPDTQVDNKLQEIVSCAVELFPELWKQAGCYHEAITAYRNALLSQWNLDNDCCARIQKAFAVFLLYSGVEASPPSFSVQTEGSYVPKNNLEEAILLLMIVLRKFSLGKIKYDPSVMEHLTFALSACGETSILAKQFEEMLPGVYHRIDRWNSLALCLSGAGQSKSALNLLRKSLHKHERPDDLIALLLAARICSEDPHLSAEGAGYAQRAIDKAQGLNEHLKGVGLRMLGLCLGKQAKVASSDFERSMLQSKALQSLEEAVRLEQNNFDLIFELAIQYAEHRNLAVALRYAKQFFDKTGGSKLKGWKLLSLVLSAQKRFSEAEVVTDAALDETAKWEQGPLFRIKAQLKIAELRPMDAIEIYRYLLALVQAQKKSAGPQKLSSQDEEDQINEFDVWHGLANLYASLSHWKDAEICLQKARELKEYSAATIQTEGVVFDGRGQNDEAVAAAVNAVLVEPNHVPSKILMGSLMLKNGSKALPVSRSLLSDALRIEPTNRNAWYHLGLTHKDDGRMGDAADCFQAASMLEESDPIESFSCML* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3163 689 Gene3D Tetratricopeptide repeat domain 18 195 IPR011990 GO:0005515
Mal5g3163 689 SUPERFAMILY TPR-like 113 438 IPR011990 GO:0005515
Mal5g3163 689 PANTHER CALMODULIN-BINDING PROTEIN 2 688 - -
Mal5g3163 689 Gene3D Tetratricopeptide repeat domain 533 616 IPR011990 GO:0005515
Mal5g3163 689 SUPERFAMILY TPR-like 417 677 IPR011990 GO:0005515
Mal5g3163 689 MobiDBLite consensus disorder prediction 85 104 - -
Mal5g3163 689 ProSiteProfiles TPR repeat profile. 647 680 IPR019734 GO:0005515
Mal5g3163 689 Pfam Tetratricopeptide repeat 20 70 - -
Mal5g3163 689 SMART tpr_5 577 610 IPR019734 GO:0005515
Mal5g3163 689 SMART tpr_5 113 146 IPR019734 GO:0005515
Mal5g3163 689 SMART tpr_5 297 330 IPR019734 GO:0005515
Mal5g3163 689 SMART tpr_5 543 576 IPR019734 GO:0005515
Mal5g3163 689 SMART tpr_5 647 680 IPR019734 GO:0005515
Mal5g3163 689 PANTHER PROTEIN NPG1 2 688 IPR043376 -
Mal5g3163 689 Gene3D Tetratricopeptide repeat domain 232 526 IPR011990 GO:0005515
Mal5g3163 689 Gene3D Tetratricopeptide repeat domain 617 684 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3163 Mal-Chr5 92494422 92498966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3163 7 689 Calmodulin-binding Proteins AT2G43040 69.723 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3163 K21843 - gmx:100811897 1122.07