Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3160 ATGAAAAGATCCAAAGATAACGATGGTGTTGACATTGATTCACAACTCAAACGCCCCACGCTATCTTCTACACAAGACTCGAATTTGTCTGACGGGCTGAGTACTGACAAGGCCATTGATTCGCAAGGTGATCATGATCTCGTTGTCGAAAATCCTGATCCAAAACCTGACAAAGGTTTGATGAGTGCAGAGGTGTCCGATGGACTAAACAGGGACATGACCATTGATACGAAAGGTATGTCTAGTGAAGCTCTTGCTTTCCTTGAAAAAGTCAAGGAGAGGTTAGGAAATATTAAGGATTACCAAACTCTTGTGAAGTCCCTGCATAGCTACAGAATGGGAACAATCACCCGAGAAGGACTACAAACAATGGCAGGCCATTTATTGGGAATACATGCCGATCTTGTGGAGGGATTTAATGAGTTTTTGACACAATATGACTCCAATGGTATGTATAGTGGAAGGGCTTTCTTTGAAAAAGTCAAAGAGAAGTTAAGCAATCGTGAAAATTATGAGGATCTTTTGAAGTGCCTACATATCTACGCCAGAGAAATAATTACCCGAGAGGAATTACTGGCATTGGTAGATGATATACTGGGAAAATATACCGATCTTATGGAGGAATTTAATGATTTTTTGACACAATGTGAAAAGAAGGATGCTGATTTTGCTAAATGGTCATTAAATCTTTCATGA 696 0.3966 MKRSKDNDGVDIDSQLKRPTLSSTQDSNLSDGLSTDKAIDSQGDHDLVVENPDPKPDKGLMSAEVSDGLNRDMTIDTKGMSSEALAFLEKVKERLGNIKDYQTLVKSLHSYRMGTITREGLQTMAGHLLGIHADLVEGFNEFLTQYDSNGMYSGRAFFEKVKEKLSNRENYEDLLKCLHIYAREIITREELLALVDDILGKYTDLMEEFNDFLTQCEKKDADFAKWSLNLS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3160 231 PANTHER - 80 219 - -
Mal5g3160 231 MobiDBLite consensus disorder prediction 38 53 - -
Mal5g3160 231 ProSiteProfiles PAH domain profile. 144 216 IPR003822 GO:0006355
Mal5g3160 231 MobiDBLite consensus disorder prediction 16 37 - -
Mal5g3160 231 Pfam Paired amphipathic helix repeat 169 213 IPR003822 GO:0006355
Mal5g3160 231 MobiDBLite consensus disorder prediction 1 68 - -
Mal5g3160 231 SUPERFAMILY PAH2 domain 78 144 IPR036600 GO:0006355
Mal5g3160 231 Gene3D Paired amphipathic helix 149 218 IPR036600 GO:0006355
Mal5g3160 231 Gene3D Paired amphipathic helix 76 148 IPR036600 GO:0006355
Mal5g3160 231 PANTHER SIN3B-RELATED 80 219 IPR039774 GO:0003714
Mal5g3160 231 SUPERFAMILY PAH2 domain 148 216 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3160 Mal-Chr5 92410162 92415727 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g3160 PAH 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3160 K11644 - mtr:MTR_8g469180 244.973