Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3158 ATGCAGAATTCTTTATCATCGATCAATTATCTTAAGGCAGTCAAGGATGTCTTCAAAGAAAGAATGGAAAACTATTCTTACTTTTTGGAAATAATGAAGGATTACAAAGAAAAAAGAATTGATTACCATGATGTTGTAACGAAGGTGAAGGAGTTGTTTAAAGGACACACTGATCTAATTATGGGATTTAACATCTTTGCACCAAGTGGTTATCAAATCCCAATTTCAGAAGAAGATGAGCAACCTCCTAATATGATTCTTGATAAACCTCAAATGAAAATTCCATTGGAAGAGGTAAATCCTCTTAATGCACAATCTTCTCAGGTGATGCTTGGTGGAGATCATATCACAGCTCCATCCGGAAATGAAGTATGTGTTATGAAGATACCTGGTGGATCTGAACATGCTAAAAAGTTTGTGTGTATCTCACAACATAGGCATGTGCGCACAAACATACAATGA 462 0.355 MQNSLSSINYLKAVKDVFKERMENYSYFLEIMKDYKEKRIDYHDVVTKVKELFKGHTDLIMGFNIFAPSGYQIPISEEDEQPPNMILDKPQMKIPLEEVNPLNAQSSQVMLGGDHITAPSGNEVCVMKIPGGSEHAKKFVCISQHRHVRTNIQ* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3158 153 ProSiteProfiles PAH domain profile. 1 70 IPR003822 GO:0006355
Mal5g3158 153 SUPERFAMILY PAH2 domain 6 68 IPR036600 GO:0006355
Mal5g3158 153 Gene3D Paired amphipathic helix 7 68 IPR036600 GO:0006355
Mal5g3158 153 PANTHER SIN3B-RELATED 9 140 IPR039774 GO:0003714
Mal5g3158 153 Pfam Paired amphipathic helix repeat 23 66 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3158 Mal-Chr5 92337754 92338602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3158 7 89 WRKY Transcription Factor Family AT4G12020 48.193 3.90e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g3158 PAH 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3158 K11644 - mtr:MTR_8g062350 176.022