Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3156 ATGGAGAAAACAAGATCCTCCGATCAAGTTGTTCTCTTCCTTGACCAACAACCCAACCCAAAACCTTCCACTATGGACACTGAAACTCACCACAACACCGAACCTCATCAAGAGAAGCCTAAACATCCCTCAAGAGCAAAAACCCTTAACCGTCTAAGCTTCTCAAAACCCAAGTCCCGAATCCTTGAATACAACCATCAACCTCGCAACAAATTACCTACCACCGAAGAAGAAGACACTCATTTACCTTCATACAAGGTCTCTTCGGATGACGAAGACGACGACTATGAATACCATGAAGAAGAAGAATCAGAGGGAGATGACGACGAGGTTTTGCGCGATCAGAAGTTACACAACAAAAAGAAAAAATTTAAAGTGAAGTGGAGGCTAGTTTTTGAATGGATACTATTTCTAAACATATTAACATGTTTGGTTTGTTCTATCACAATAAGAGGAATAACAAACATGCATTTATTAGGGTTAGAGGTTTGGAGATGGTGTTTAATGGCAATGGTAACATTTAGTGGTCGTTTAGTTTCATGTTGGTTAGTTAGTTTCACCGTTTTCATCATCGAAAGAAACTTTATGCTAAGAGAAAAAGTTTTATATTTCATCTACGGTTTAAGAAACAGCATTCGTAATTGTTTATGGTTAGGTCTTGTTTTATTGTCATATTGGAGTGTCGTTTTTGACGATGTTCAAAAGAAAAACCATAAATTCCTCAACAAAATGTTTCAAGCACTTGTTGCTGTTTTAGTAGGTGCAACAATTTGGTTAGTGAAAATTGTTTTAGTAAAAATGTTGGCTTCTTCATTTCATGTGACAACATATTTTGATAGAATGAAAGAAAGTGTTTTTCATCATTATGTGTTGGATGCATTGTCGGGTCCACCGGTCGAAAATGGCGAGGAAATATCGAAAGAGCATCATTTGATGGGATCGAAGACGTTGCCGGCGGGTGTAGGGAGGTGGAAGAAGATGAAGAGATTTGGTTCAAGGAGGATTGATATGGAGAAGTTGAAGAAACTTAGTATGGAGAGTAATGCTTCTGTTTGGAGTGTTAAAAGACTTGTTAATTATGTTAGGTCTTCGGGTTTGTCAACTATTTCTAAGACTGTTGATGGTTTTGGTAATAGTGAGAGTGAGATTAGTAGTGAATGGGAAGCTAGAAGTTGTGCTCAGAAGATTTTCAACAATGTTGCCAAACCTGGTGCCAAGTATATTGAAGAGGTGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTCCCACTCTTTGAAGGTGCTCTTGAAACTGGAAAGATTAGCAGATCTTCCTTTAGAAATTGGGTGATTCGAGCTTATTATGAACGAAAAGCTTTAGCACAATCATTGAATGATACCAAAACAGCAGTGCAACAACTTCACAAATTAGCAAGTGCAGTTGTGAGTGTGATAATAATAATTGTGACCCTTTTGGTGATGGAAGTGGCTACCATCAAGATAATATTATTTTGTATCACACAAACTGTTTTAATAGGAGTTGCCTTTCAAGGCACATGCAAAACTGTCTTGGAAGCCATCATCTTTGTCTTCATCATGCACCCTTTTGACATTGGAGACCGTTGTGTCATTGATGGTGTACATATGATTGTGGAAGAAATGAATATATTGACAACAGTGTTCCTTCGATATGACAATGAGAAAATATACTACCCTAATGCAGTTTTGCTTACTAAGCCAATAAGCAATTTCTATAGGAGTCCAGAAATGTCTGATGCAATTGATTTCACCATTGATGTTACAACTCCTATAGAGACTATCATTGCACTCAAGAAATCAATACAAATGTACATTGAAAGCAAACCAAAGTATTGGAATCCAAAGCATAGTGTGATGGCAAAACAAATAGATCATGTGGACAAGTTAAAGCTGTGTTTATGTGTGACACACACCATTAACCATCAGAACTATGGTGAGAGAAGCACTAGGATATCAGAACTCCTCTTGGAATTGAAAAAGATGTTTGAGATTCATGGTATCAAGTACCATCTTCTTCCTCAAGAAATCCATCTCACTCAAATGAATATTGGAAATGGGAGAGTTATGTTTCAATCATGA 2109 0.3722 MEKTRSSDQVVLFLDQQPNPKPSTMDTETHHNTEPHQEKPKHPSRAKTLNRLSFSKPKSRILEYNHQPRNKLPTTEEEDTHLPSYKVSSDDEDDDYEYHEEEESEGDDDEVLRDQKLHNKKKKFKVKWRLVFEWILFLNILTCLVCSITIRGITNMHLLGLEVWRWCLMAMVTFSGRLVSCWLVSFTVFIIERNFMLREKVLYFIYGLRNSIRNCLWLGLVLLSYWSVVFDDVQKKNHKFLNKMFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYVLDALSGPPVENGEEISKEHHLMGSKTLPAGVGRWKKMKRFGSRRIDMEKLKKLSMESNASVWSVKRLVNYVRSSGLSTISKTVDGFGNSESEISSEWEARSCAQKIFNNVAKPGAKYIEEVDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAVVSVIIIIVTLLVMEVATIKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLTKPISNFYRSPEMSDAIDFTIDVTTPIETIIALKKSIQMYIESKPKYWNPKHSVMAKQIDHVDKLKLCLCVTHTINHQNYGERSTRISELLLELKKMFEIHGIKYHLLPQEIHLTQMNIGNGRVMFQS* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3156 702 MobiDBLite consensus disorder prediction 27 45 - -
Mal5g3156 702 PIRSF Memb_At2g17000 5 700 IPR016688 -
Mal5g3156 702 SUPERFAMILY Sm-like ribonucleoproteins 523 581 IPR010920 -
Mal5g3156 702 MobiDBLite consensus disorder prediction 1 111 - -
Mal5g3156 702 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 700 - -
Mal5g3156 702 MobiDBLite consensus disorder prediction 62 89 - -
Mal5g3156 702 Pfam Mechanosensitive ion channel 473 678 IPR006685 GO:0016020|GO:0055085
Mal5g3156 702 MobiDBLite consensus disorder prediction 90 109 - -
Mal5g3156 702 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 700 IPR016688 -
Mal5g3156 702 Gene3D - 532 581 IPR023408 -
Mal5g3156 702 MobiDBLite consensus disorder prediction 9 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3156 Mal-Chr5 92281847 92289172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3156 40 692 Mechanosensitive Ion Channel Family AT5G12080 42.711 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3156 K22048 - gmx:100813521 1088.17