Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3154 ATGTTTACATGCATAGCTTGTACGAAACAAACGTCAGATGAGAGAGATGAAGATGGCCGGGAGAGTGGCACGCCTAGTACTAAAGAAGCCGTCAAAAGCCTCACAACACAGATAAAGGATATGGCACTCAAATTTTCAGGTGCTTACAAGCAATGCAAACCATGCACAGGAGGATCAAGTAGCTACAACAAGAAAGGACATAGACCATATCCAGACTTTGACACAATCTCAGAAGGGGTTCCATACCCTTACATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACTACCTCTAACTACCCCGGTGCAAGATATGCGGGAGACCGCACCCCTAGAGGACGCGACTCTGCATCAGTCTGTGATGTTGTGTTAGAGGATGAGGATGAACCTAAGGAATGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGCTTTAGCCGTGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGAGAGAATTATGACAGAATCATGGAACTTTACAATGTGCAAAGATTTAATCGACAAGCTCTCAACACTCCTCCAAGGTCTGAGGCCGATGAGCAAAGAGATTCTACTTACTCAAGATTGACCTCAGCAAGAGAAAGTCCTATGGCATCAGTTAAGGATTGGACACCAAGGAGTCACTACAGACCCTCTGGATTGGATCAAGGCGGGGGCAACCACTTTCAAGGTGGGTCATCTTTGGAACCATCAAGGGCAACCACCTCATCTAGGGATGAGCCTTCGATTAGCAATGCAAGTGAAATGGAGTCAGAATGGGTTGAACAAGATGAGCCTGGAGTTTACATTACAATCAGACAGTTAGCTGATGGTACTCGGGAGCTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTAAATGCAAAAACATGGTGGGAAGATAACAGAGAAAGAATACAAGCTCAATACCTTTGA 1005 0.4577 MFTCIACTKQTSDERDEDGRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGGSSSYNKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPPRSEADEQRDSTYSRLTSARESPMASVKDWTPRSHYRPSGLDQGGGNHFQGGSSLEPSRATTSSRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEDNRERIQAQYL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3154 334 MobiDBLite consensus disorder prediction 10 25 - -
Mal5g3154 334 MobiDBLite consensus disorder prediction 247 278 - -
Mal5g3154 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 IPR044532 -
Mal5g3154 334 Pfam Transcription factor regulating root and shoot growth via Pin3 278 333 IPR013591 -
Mal5g3154 334 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Mal5g3154 334 MobiDBLite consensus disorder prediction 198 282 - -
Mal5g3154 334 ProSiteProfiles BRX domain profile. 279 334 IPR013591 -
Mal5g3154 334 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Mal5g3154 334 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 334 - -
Mal5g3154 334 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Mal5g3154 334 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3154 Mal-Chr5 92227889 92233026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3154 1 334 Major Intrinsic Protein MIP AT1G31880 68.376 5.57e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3154 - - ccaj:109789470 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3154 5 92227889 92233026 Mal5g3154 5 92227889 92233026 ECH