Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3117 ATGGCGATGCTATTGAGAAAACTATGCGAATCAGCATCATCATCGTTAAAGAGATCCACCAACACAAACTCATCCTCCTCCAATTCAAACTCATCATCATCACGATCACACCATCATCATCAACATGCCCCTCCTTTGGGTTTATTCGACTCACTCCCTCCTGAAATACTCCTCAAAATCATACGACTTTTGGATCCTAAACACGCTGCCAAACTCTGCCTCGTTTGCAAGTCATGGAGATCTCTCGTCTCCGATAACCAACTGTGGGCCCATTTTCTTCAAACTCACCACCCTTTACACTTTCACTCTATTCTCTTCTCAGAAACCAACTTAACTTCTGGTTATCCTCTTCCGCTGTTTGATACTCAGACAACAACGCCACGCTTGTCGTTTAAGCATGTTTTTGGACATCTAGACCGTCTTCCTCCTGTTGTTATCATCGACGGTGGTTCAGGGTATTGCAAATTTGGTTGGAACAAAGAGGACCGTCCATTGGGGCGAACAGCAACCTTTTTGGAATTTGGTAATGTGGAGACGCCGATATATACTAGGCTTCGGCATTTTTTTGCGACTATCTATGGCAGGATGAAGGTGAAACCAAGCTCTCAAGCGGTTGTTGTTTCTTTGCCACTATGCCACTATGATGATACTGAATCAGCCAAAGCATCAAGACAGCAGCTTAAAGAAGCAATCTGCGCTGCTCTGTTTGACTTGAATGTTCCTGCTGTTTGTGCTCTCAACCAGGCAACTTTAGCTCTGTATGCTGCAAATCAAACTTCTGGAATAGCTGTTAATATAGGCTTTCAAGTCACATCTGTAGTCCCAATTTTAAATGGTAAAGTTATGCACAAGGTGGGTGTGGAGGTTGTGGGGATCGGAGCACTAAAACTTACAGGATTTCTTAGAGAGAAAATGCAACAAAACAACTTATATTTTGAATCTTTGTACACTGTTCGCACACTGAAAGAGAAGCTATGCTATGTTGCCTATGACTATGAAGCTGAGCTATTGAAAGATACACATGCATCATTTGACGCCGTTGAAGGGAAGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGAGAGATCTTATTCCAGCCACGTCTTGCTGGGGTGCGAGCAATGAGTTTGCACCATGCTATAGCTCTCTGTATGGACCATTGTCATTCTGCAGAATTAGCAGGCGGCAGTGATTGGTTTAAGACCGTTGTCTTATCGGGAGGGTCTGCATGTTTACCAGGCTTAGCAGAGAGGTTAGAGAAGGAACTTCATTCGTTACTTCCTCCTTATATGTCGAATGGAATCAGAGTCATTCCTCCTGCACACGGTGCAGATACTGCATGGTTTGGTGCAAAGCTTATTGGCAGTTTGAGTACCTTTCCTGCCCCCTGGTGTATAACAAAGAAGCAGTTCCGTCAGAAGTCTAAACTCAATCGAATATGGTGA 1446 0.4378 MAMLLRKLCESASSSLKRSTNTNSSSSNSNSSSSRSHHHHQHAPPLGLFDSLPPEILLKIIRLLDPKHAAKLCLVCKSWRSLVSDNQLWAHFLQTHHPLHFHSILFSETNLTSGYPLPLFDTQTTTPRLSFKHVFGHLDRLPPVVIIDGGSGYCKFGWNKEDRPLGRTATFLEFGNVETPIYTRLRHFFATIYGRMKVKPSSQAVVVSLPLCHYDDTESAKASRQQLKEAICAALFDLNVPAVCALNQATLALYAANQTSGIAVNIGFQVTSVVPILNGKVMHKVGVEVVGIGALKLTGFLREKMQQNNLYFESLYTVRTLKEKLCYVAYDYEAELLKDTHASFDAVEGKFTLSKERFQTGEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLEKELHSLLPPYMSNGIRVIPPAHGADTAWFGAKLIGSLSTFPAPWCITKKQFRQKSKLNRIW* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3117 481 MobiDBLite consensus disorder prediction 13 47 - -
Mal5g3117 481 SMART fbox_2 52 92 IPR001810 GO:0005515
Mal5g3117 481 PANTHER ACTIN 103 477 IPR004000 -
Mal5g3117 481 Pfam Actin 218 472 IPR004000 -
Mal5g3117 481 CDD NBD_sugar-kinase_HSP70_actin 145 289 - -
Mal5g3117 481 Gene3D - 186 474 - -
Mal5g3117 481 Gene3D Actin; Chain A, domain 4 292 374 - -
Mal5g3117 481 SUPERFAMILY F-box domain 38 103 IPR036047 GO:0005515
Mal5g3117 481 Gene3D - 36 116 - -
Mal5g3117 481 PANTHER ACTIN-RELATED PROTEIN 8 103 477 - -
Mal5g3117 481 SUPERFAMILY Actin-like ATPase domain 143 264 IPR043129 -
Mal5g3117 481 Gene3D - 249 446 - -
Mal5g3117 481 SUPERFAMILY Actin-like ATPase domain 259 472 IPR043129 -
Mal5g3117 481 MobiDBLite consensus disorder prediction 13 34 - -
Mal5g3117 481 Pfam F-box-like 50 92 IPR001810 GO:0005515
Mal5g3117 481 SMART actin_3 142 481 IPR004000 -
Mal5g3117 481 ProSiteProfiles F-box domain profile. 46 92 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3117 Mal-Chr5 91466963 91473457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3117 191 473 Cytoskeleton Gene Families AT5G09810 31.864 8.02e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3117 K16616 - gmx:100804254 737.643