Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3116 ATGGAGAAAAAGGAATCATCAGCTAGTTATGATCAACATGAAGATGCTAAAAATGGTACAAAATTTGATGGAAGTTCTGTGACAGTTTCATCTAATTCTGGAACCAGTAAAGAATCTGTGAACAAATGGATGGCATTTGCTAACAAACCAGATGAAAATTCAACATCAACAAAGGCTCCTTCTGGTGATGATGATCAAATTCTAACCGAAGCAGCCATAGCCGAGAGAACTGCGGAATGGGGACTAGTTGTGAATTCAGGCAACTTCAAAGCAGCAATTGAGACAACAAGTTCTTCATTTGATGGTGATAGGAGCAAAAGTTTGTCAGATAGGTTTGTTGATTCAACAAGGACTTCAGGGGAATCGAATTATGGTTCGGAAGCTAAATTGTCGGGGTTGTTTCCAAGAGTTTCACAAGAATTGAAGGATGCACTGTCTACACTTCAACAAACATTTGTTGTCTCAGATGCAACTAAACCTGATTGTCCTATCTTGTATGCAAGCAGTGGTTTTTTTAGTATGACTGGTTACTCTTCTAAGGAGGTTATTGGAAGGAATTGCCGATTCCTTCAAGGACCTGAAACTGACAAGAATGAAGTAGCGAAAATTCGGGATGCAACGAAGAATGGGAGAAGTTATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCATTTTGGAATCTTCTCACTGTCACTCCAATCAAGGATGATCATGGCAATACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATACACAGAAGGTGTGAATGAGAAGGCACTAAGACCAAATGGATTACCAAAATCATTAATTCGCTATGACGCTCGTCAAAAGGAGGAAGCTATGGGTTCAATCACTGAGGTTGTTCAAACTGTTAAGGATCCAAAATCGATTATTCGCGGTAATAAAGATGACGCTGCAACCATCATGCATGAAGAGCCAGAGAAACTCAATCATGATTTTCTTTTGCCGAAGTCCGTTGAACCAGTGAACGCCAGTACACCACCTGGTAGACATACTCCATTGAAATTCCAAGGTGATAATAATAATAATAATAATAATAATAATATGTCGCGCTTTAGTTCTTACGAGGAAAGGGACAAGTCATCAAGAAAATCTGGACTGACTTCTTTCAAAGGTGTTAAAGGGAAATCTATGAGTGCTGTAGGAAGAGATAAGGAGAAGGCTATGGTTGAACCTGAAGTTTTGATGACAAAGGAAATAGAGTGGTCTAAATGGGAGCTAAGAGAGAGAGATATAAGGCAAGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATTGTCCAATTATATTTGCATCAGACAGCTTTCTTGAGCTTACAGAATATACACGAGAAGAAATTTTGGGTCGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGACCAAACAACTGTCAATAAGATTAGAGATGCTATCAGAGATCAGAGGGAAATCACAGTTCAGTTGATCAACTATACAAAAAGTGGAAAGAAATTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGATGGAAGTGATCATTTAGAACCTTTAAGAAACCGCCTGTCTGAGGGTTCTGAGATACAAAGTGCTAAATTGGTGAAAGCCACTGCAGAAAATGTTGATGGAGCTGTTAGAGAACTTCCTGATGCCAATTTGAGACCAGAAGATTTGTGGTCAATTCATTCTCAACCAGTTTTTCCACGACCACACAAAAGAGACAATCCTTCTTGGGTAGCTATTCAAAAGATAACTGCAAGAGGAGAGAAAATTGGGCTTCATCATTTTTCTCCCATTAGGCCCTTGGGCTGTGGAGATACTGGCAGTGTTCATTTAGTGGAACTCCAAGGTACCGGCGAACTATATGCAATGAAGGCCATGGAAAAATCTGTAATGCTTAATCGTAATAAGGTTCATCGAGCGTGCATCGAAAGAGAGATAATATCATTACTGGATCATCCTTTTCTTCCAGCACTATACACCTCATTTCAGACAGATACACATGTATGTTTGATTACTGACTTCTGCCCTGGGGGCGAGTTGTTTGCATTACTCGACAGACAACCCATGAAGATTTTAAAAGAAGATTCAGCAAGGTTCTATGCAGCAGAGGTTGTTGTTGGTTTGGAATATCTCCATTGTTTGGGTATAATTTATCGTGACTTAAAGCCTGAAAATCTCTTGCTTTCGAAGGATGGCCATATAGTATTAACTGATTTTGATCTATCATTTATAACATCTTGTAAACCCCAGGTTGTGAAGCAGTCATTACCTACTAATAGAAGAAGATCTCGAAGTCAGCCACCACCGATATTTGTTTCCGAACCAGTAACACAATCAAACTCATTTGTTGGAACTGAAGAATACATTGCCCCGGAAATCATAACCGGAGCGAGGCATACAAGTGCTATCGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTATATGGCCGTACACCTTTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTGATTAATGCACTATTGCAAAGAGATCCAGGCAGTCGTCTAGGTTCAACTACAGGATCTAATGAAATCAAACAACATCCTTTTTTCCGTGGAATCAATTGGCCTTTAATCCGCAACATGAGTCCACCCCCTTTAGATATTCCTCTTCAATTTATAGGAAAAGATCCAACTGCAAAGGACAAGACATGGGAAGATGATGGTGTGCTAATTAGCTCCATCGATATGGATATTTTTTAA 2892 0.3966 MEKKESSASYDQHEDAKNGTKFDGSSVTVSSNSGTSKESVNKWMAFANKPDENSTSTKAPSGDDDQILTEAAIAERTAEWGLVVNSGNFKAAIETTSSSFDGDRSKSLSDRFVDSTRTSGESNYGSEAKLSGLFPRVSQELKDALSTLQQTFVVSDATKPDCPILYASSGFFSMTGYSSKEVIGRNCRFLQGPETDKNEVAKIRDATKNGRSYCGRLLNYKKNGTPFWNLLTVTPIKDDHGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEEAMGSITEVVQTVKDPKSIIRGNKDDAATIMHEEPEKLNHDFLLPKSVEPVNASTPPGRHTPLKFQGDNNNNNNNNNMSRFSSYEERDKSSRKSGLTSFKGVKGKSMSAVGRDKEKAMVEPEVLMTKEIEWSKWELRERDIRQGIDLATTLERIEKNFVISDPRLPDCPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQTTVNKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHLEPLRNRLSEGSEIQSAKLVKATAENVDGAVRELPDANLRPEDLWSIHSQPVFPRPHKRDNPSWVAIQKITARGEKIGLHHFSPIRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPALYTSFQTDTHVCLITDFCPGGELFALLDRQPMKILKEDSARFYAAEVVVGLEYLHCLGIIYRDLKPENLLLSKDGHIVLTDFDLSFITSCKPQVVKQSLPTNRRRSRSQPPPIFVSEPVTQSNSFVGTEEYIAPEIITGARHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPGSRLGSTTGSNEIKQHPFFRGINWPLIRNMSPPPLDIPLQFIGKDPTAKDKTWEDDGVLISSIDMDIF* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3116 963 ProSiteProfiles PAS repeat profile. 137 210 IPR000014 -
Mal5g3116 963 Pfam Protein kinase domain 630 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3116 963 Gene3D PAS domain 416 579 - -
Mal5g3116 963 ProSiteProfiles PAC domain profile. 500 554 IPR000700 -
Mal5g3116 963 CDD PAS 164 253 IPR000014 -
Mal5g3116 963 SUPERFAMILY PYP-like sensor domain (PAS domain) 445 541 IPR035965 -
Mal5g3116 963 ProSiteProfiles PAC domain profile. 211 265 IPR000700 -
Mal5g3116 963 SMART pac_2 214 256 IPR001610 -
Mal5g3116 963 SMART pac_2 503 545 IPR001610 -
Mal5g3116 963 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g3116 963 SMART pas_2 139 208 IPR000014 -
Mal5g3116 963 SMART pas_2 428 497 IPR000014 -
Mal5g3116 963 MobiDBLite consensus disorder prediction 1 65 - -
Mal5g3116 963 Pfam PAS domain 449 541 IPR000014 -
Mal5g3116 963 Pfam PAS domain 158 254 IPR000014 -
Mal5g3116 963 SMART serkin_6 627 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3116 963 MobiDBLite consensus disorder prediction 333 383 - -
Mal5g3116 963 PANTHER BNAA02G07840D PROTEIN 101 962 - -
Mal5g3116 963 Gene3D PAS domain 151 314 - -
Mal5g3116 963 MobiDBLite consensus disorder prediction 347 364 - -
Mal5g3116 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Mal5g3116 963 PANTHER FLIPPASE KINASE 1-RELATED 101 962 - -
Mal5g3116 963 SUPERFAMILY Protein kinase-like (PK-like) 604 942 IPR011009 -
Mal5g3116 963 SUPERFAMILY PYP-like sensor domain (PAS domain) 158 250 IPR035965 -
Mal5g3116 963 Gene3D Phosphorylase Kinase; domain 1 626 710 - -
Mal5g3116 963 MobiDBLite consensus disorder prediction 21 63 - -
Mal5g3116 963 Gene3D Transferase(Phosphotransferase) domain 1 711 928 - -
Mal5g3116 963 CDD PAS 453 541 IPR000014 -
Mal5g3116 963 ProSiteProfiles Protein kinase domain profile. 627 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3116 963 TIGRFAM sensory_box: PAS domain S-box protein 163 254 IPR000014 -
Mal5g3116 963 TIGRFAM sensory_box: PAS domain S-box protein 453 541 IPR000014 -
Mal5g3116 963 ProSiteProfiles PAS repeat profile. 426 499 IPR000014 -
Mal5g3116 963 CDD STKc_phototropin_like 625 937 - -
Mal5g3116 963 ProSitePatterns Protein kinases ATP-binding region signature. 633 656 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3116 Mal-Chr5 91448663 91456292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3116 34 962 AGC Kinase Gene Family AT5G58140 70.481 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal5g3116 Pkinase 8.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3116 K20715 - gmx:100804783 1531.54