Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3101 ATGGCTCGTTCAGTTCCTTTGGTTTCCACCATCTTTGTCTTCCTTCTCCTTCTTGTGGCCACTGGGCCAAGTATGGTGGCAGAGGCAAGGACTTGTGAGTCACAAAGTCACAAATTCAAAGGACCATGTGCAAGTGATCACAATTGTGCTTCTGTTTGCCAAACAGAACGTTTCTCTGGAGGACACTGCCGTGGATTCCGTCGTAGATGCTTTTGCACTACACATTGTTAA 231 0.4675 MARSVPLVSTIFVFLLLLVATGPSMVAEARTCESQSHKFKGPCASDHNCASVCQTERFSGGHCRGFRRRCFCTTHC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3101 76 Pfam Gamma-thionin family 30 76 - -
Mal5g3101 76 SMART gth_4 31 76 IPR003614 GO:0006952
Mal5g3101 76 Gene3D - 30 76 IPR036574 -
Mal5g3101 76 SUPERFAMILY Scorpion toxin-like 30 76 IPR036574 -
Mal5g3101 76 CDD Knot1 41 73 IPR003614 GO:0006952
Mal5g3101 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Mal5g3101 76 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Mal5g3101 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Mal5g3101 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
Mal5g3101 76 PANTHER DEFENSIN-LIKE PROTEIN P322 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3101 Mal-Chr5 90968768 90969220 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3101 1 76 Plant Defensins Gene Families AT2G02130 58.442 1.99e-28 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3101 - - gmx:547843 103.219