Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3097 ATGGCTCGTTCAGTGCCTTTGGTTTCCACCATCTGTTTCCTACTTCTTGTGGCCACCGCTGAGATGGGGCCTAGTATTGTGGTAGAGGCAAGGACTTGTGAGTCTCCAAGTCACTCCTTCAAAGGAGCATGTTTGAGTGACACCAATTGTGCTTCTGTGTGCCTAACTGAGGGTTTCCCTGGAGGACACTGTGAAGGCTTACGTCGTAGATGCTTTTGCACTAAACCTTGTTAA 234 0.4872 MARSVPLVSTICFLLLVATAEMGPSIVVEARTCESPSHSFKGACLSDTNCASVCLTEGFPGGHCEGLRRRCFCTKPC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3097 77 Gene3D - 31 77 IPR036574 -
Mal5g3097 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Mal5g3097 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Mal5g3097 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Mal5g3097 77 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Mal5g3097 77 SMART gth_4 32 77 IPR003614 GO:0006952
Mal5g3097 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Mal5g3097 77 PANTHER DEFENSIN-LIKE PROTEIN P322 1 77 - -
Mal5g3097 77 Pfam Gamma-thionin family 31 77 - -
Mal5g3097 77 CDD Knot1 42 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3097 Mal-Chr5 90906860 90907297 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3097 1 77 Plant Defensins Gene Families AT2G02120 57.692 6.92e-27 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3097 - - gsj:114420878 122.864