Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3086 ATGGATCCTTTCTCATTAACCCTTGAAACTCCTTCTCAACCTTCTTCTCATGTTTCTGTTGCTATTCCCACCCCCAATTTTACTATTTCTCACCAAATCCCTAATTTCTCACCTCCACCCCCAACCACGACCATTTCCGCCGGAGCACCGCTTCAGACGCTGCTCGTTCCAAAGGCGGAACCTTTTGATGATTTCTTCGCTACCCAAGATACCCAACAACAACCCGAGTTCTCTCCTGGCTCTGAACACGATGATCAATCCGACCTTTACAATGAATACTACCGCATTTCGCAGCTTTTCAATGCTACTTTCGGTAAATCGCTTTACCCTTTTATGGGAATCGATGATTCCAATGATGGTGCTGCTGTTTCGATGGAGAATTTGGTCAATGGTTGTAACCCTGACCTAAATCTGAACCCTAATTTGATGGTGGATGATTCTGTGACTGTGGATGATGGGAATGATCGAGCAATTGTTGTTGTTCCGGAGAAAAATGAGTCGAGTTCGGCGGTGGCGGTGGTTAGGAAGAAAGCGAACCAGGTGATGGAGCTTGTGAGGGTTTCAGATCTGAGTATGAAGGATCAGATGCATTTTCGTGATGTGATGAGGAGGACGAGGATGATTTATGATTCTCTTCGTGTGTTGGCGAGTATTGAGGAGGAGAAGAGAATGGCTGAGGAGAGGAAAGTGGCTGCTGAGGTTGCTGTGCAGGAAGAGAGGAGATTGGCTGAGGAGAGGAGGTTGGCTGAGGAGAGGAGGTTGGCTGCAGAAGTTGCGGTTATGGAGGCGGAGATGAGAGTGGGTGAGGAGAACGGGGCAGCGGCTGCAGGGGTGGAGGGGGAAATGTCAAATGGAAAAAGGCGTCGTGGTCGCTACCGCATTCGTGGTGATATGAGGGCAGCAGCGTTGATGAGGAAGCGTGAGTTGTGGCTGTATCGCGATAAGAGGATAGTTGGACCGATACCTGGAGTTTATGTTGGTGATGTGTTTCTTTTTAGGATGGAATTGTGTGTAATTGGTTTGCATATGCAAATACAAGCTGGCATTGATTATCTACCTAAAAGTAGGTGTTCCAATGGTGAACCAATTGCTACTAGTGTGATTGTTTCGGGTGGTTATGAAGATGATGTGGAAATGGATGATGGCGATGTTATAATCTATACTGGCCATGGAGGACAGGATAAAAATTCCTCAAGGCAAATTTGTGATCAGAAAATGGCGGGTGGAAACCTTGCTTTGGAAAGGAGTATGCATTATGGGATTGAGGTTAGAGTTATTCGTGGGATGAAGTATGAAGGGAGTGCGTCTGGTTCTGGTAAGGTTTATGTTTATGATGGATTATATAAGATTGTTGGTTGCTGGTTTGATGTAGGAAAGTCTGGTTTTGGAGTTTTTAAGTATAAGCTAGCGAGAATTGAGGGGCAGGCTAAGATGGGTAGTGCTGTTCTCAGAGATGCTAGGGAAATTAAGAAAAATGGGTTTGATTTTAAGCCTAAGTATTGTCTTTCTGTTGATATTTCAAGCAATAGGGAGAATGTTCCTGTTAGGCTATTTAATGACATAGATGACAATCAAGAACCTCTTTATTATGAGTATCTTCCGAGTACCAGTTTTCCGCAGTTTGTGTTTCATCAGAGTGGGAAAGCTACTGGCTGTCAATGTGTGGATTCTTGTACTGATGGTTGCTTTTGCTCTATGAAGAATGGAGGTGATTTTCCTTATAATATACAGGGTTTGCTTGTGAGAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGCTCCTGTCCTCCCAATTGTCGGAACCGTGTTGCACAAAAGGGGGTCAAATGTAGGTTGGAAGTGTTTAGGTCTGCGGAGACGGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAGGCCGGAGCCTTTATCTGCGAGTATGCAGGGGTTGTTTTGACGAGGGAACAAGCTCAAATTTTGACAATGAATGGTGACTCGTTGATATATCCAAATCGGTTTTCAGATAGATGGGCAGAATGGGGTGATTTATCTCAGATATATACTGATTATGTGAGACCATCATATCCATCAATTCCCCCGTTAGATTTTTCTCTGGATGTATCAACAATGCGAAATGTGGCTTGCTATATGAGCCATAGTTCGAGTCCTAATGTATTCGTGCAGTATGTTCTTCATGATCACAACAACTTGATGTTCCCTCACGTTATGCTATATGCAATGGAGAACATTCCTCCCATGAGAGAACTCAGCATAGATTATGGCGTCGCAGACGAGTGGACAGGCAAGCTGTCTATATGTATGTAA 2304 0.444 MDPFSLTLETPSQPSSHVSVAIPTPNFTISHQIPNFSPPPPTTTISAGAPLQTLLVPKAEPFDDFFATQDTQQQPEFSPGSEHDDQSDLYNEYYRISQLFNATFGKSLYPFMGIDDSNDGAAVSMENLVNGCNPDLNLNPNLMVDDSVTVDDGNDRAIVVVPEKNESSSAVAVVRKKANQVMELVRVSDLSMKDQMHFRDVMRRTRMIYDSLRVLASIEEEKRMAEERKVAAEVAVQEERRLAEERRLAEERRLAAEVAVMEAEMRVGEENGAAAAGVEGEMSNGKRRRGRYRIRGDMRAAALMRKRELWLYRDKRIVGPIPGVYVGDVFLFRMELCVIGLHMQIQAGIDYLPKSRCSNGEPIATSVIVSGGYEDDVEMDDGDVIIYTGHGGQDKNSSRQICDQKMAGGNLALERSMHYGIEVRVIRGMKYEGSASGSGKVYVYDGLYKIVGCWFDVGKSGFGVFKYKLARIEGQAKMGSAVLRDAREIKKNGFDFKPKYCLSVDISSNRENVPVRLFNDIDDNQEPLYYEYLPSTSFPQFVFHQSGKATGCQCVDSCTDGCFCSMKNGGDFPYNIQGLLVRGKPLIFECGPFCSCPPNCRNRVAQKGVKCRLEVFRSAETGWGVRSLDLIQAGAFICEYAGVVLTREQAQILTMNGDSLIYPNRFSDRWAEWGDLSQIYTDYVRPSYPSIPPLDFSLDVSTMRNVACYMSHSSSPNVFVQYVLHDHNNLMFPHVMLYAMENIPPMRELSIDYGVADEWTGKLSICM* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3086 767 SUPERFAMILY SET domain 496 766 IPR046341 -
Mal5g3086 767 ProSiteProfiles SET domain profile. 611 754 IPR001214 GO:0005515
Mal5g3086 767 Gene3D - 316 479 IPR036987 -
Mal5g3086 767 ProSiteProfiles Pre-SET domain profile. 550 608 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g3086 767 Gene3D SET domain 480 767 IPR046341 -
Mal5g3086 767 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 94 766 IPR025794 GO:0016571
Mal5g3086 767 Pfam SAD/SRA domain 318 475 IPR003105 -
Mal5g3086 767 Pfam SET domain 622 754 IPR001214 GO:0005515
Mal5g3086 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 51 764 - -
Mal5g3086 767 Pfam Pre-SET motif 506 603 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g3086 767 SUPERFAMILY PUA domain-like 300 483 IPR015947 -
Mal5g3086 767 SMART preset_2 503 595 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal5g3086 767 SMART G9a_1 314 475 IPR003105 -
Mal5g3086 767 Coils Coil 215 252 - -
Mal5g3086 767 SMART set_7 611 760 IPR001214 GO:0005515
Mal5g3086 767 ProSiteProfiles YDG domain profile. 319 471 IPR003105 -
Mal5g3086 767 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 51 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3086 Mal-Chr5 90706729 90709032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3086 295 756 Su(var)3-9 homologs AT5G04940 39.875 1.70e-102 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal5g3086 SAD_SRA 1.8e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3086 K11420 - gmx:100785015 870.537