Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3064 ATGGCAGAAGACACCTTTGGAGTTGATTCACAACAAAAACATTTTGGTCGCTTAAAAGATCAAGTTCGCTTGGTTAAAAGGAAAGACTGCGAACGCTATGAGGTTGCGCCAATCCAGAACAAACTATCATTTGAGAATGGTTTTTTTATAGTGTTCCATTCATGCAAATTGTTGGTCCAGAAAAATGATGGAATGCTATTAATAGGGGTGGGTGGTCCTTCAGGGGCTGGGAAGACTGTGTTTGCTGAAAAGATATTCAACTCGATGCCTGATGTTGCAGTCATTTCAATGGACAATTACAATGATTCTAGTCGAATTGTCGATGGAAACTTCGATGATCCACGCTTAACAGACTACGAAACGTTGCTCCGAAATGTACATGATTTAAAGGCTGGAATGCCAGTCCAAGTTCCTGTGTATGATTACAAATCCAGTTCACGTACGGGATACAGGACGGTTGAAGTTCCGAGCTCTCGCATTGTGATTATAGAGGGAATTTATGCTTTGAGTGAGAGGTTGCGACCTCTACTAGACCTTCGAGTATCTGTAACAGGCGGTGTTCATCTTGACCTTATAAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTCAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTATATTGAGCCAGATCTCCAAACTGCACACATAAAAATAAACAACAAGTTTAATCCATTTTTCGGATTCCAAAGCCCTACTTACATTTTAAAGTCTACCAGGAATGTAACAGTAGATCAAATAAAAGCTGTGCTCTCCCAAAATTTTGAGGAAACAACTGAGCAAACATATGACATATATCTTCTACCACCTGGTGAAAATCCAGAGAGCTGTCAATCATATTTACGGATGCGAAATAAGGATGGGAAATATAGTCTCATGTTTGAGGAATGGGTGACTGATGATCCATTTGTCATATCACCAAGAATTACTTTTGCGGTCAGTGTGCGTCTTCTTGGTGGACTGATGGCTCTTGGATACACAATAGCAACTATTCTTAAAAGAAGTAGCCATGTCTTATCTGATGATAGGATTTGTGTTAAACTAGATTGGCTTGAGCAACTAAATCGACATTATGTTCAGGTACAGGGAACAGATCGATTAGTTGTAACGCACATAGCAAAACAAATGGGTTTGGAAGGTTCTTATGTTCCCCGTACCTACATTGAGCAGATTCAACTCGAAAAGCTTGTAATGGCCATGCCAGATGATTTAAGGACAAAGCTACACCTTAATGAGGATTTGATATCAAGCCCCAGAGCAGCATTTTTAAGAACCTCTAGTGATCGGGCTCCCATGAGACATATACGTATGAGAAGTGATATATCACAGTCATGTACAAATCACAAGGATGAGAATCAAGCCAAAGTAACTGCATTCTTTTCCAACAATCGAGGACTTCGTGAAAATAATAATTCAGATTCCGAAACAAAACAGGTAAATCAGGGTGCCATCACTCACCTTTCAGAACAAATTTCATCGCTACATGATAGAATGGGCGAGTTCACAAATCGTATTGAAGAGCTGAACTCAAAGTTAACCATCAAGAAAAATTGTCCAAGCCAACAAAATAGTGATTCTGTTCCCACCTCTTATTTCATCAATAGTTTGAGTAATGGTTCCCTAAATAGATCTATAATGACAAATTCCTCATTCCCTTCACAATTAGCTAAGGAATCACATTTAAGTGATGAGATATCAGGTATTGCGCGGTGCCAACGCCAGATAATGAATCAGTTAGATAATTTGAATAATCTTTTTTGTGGAAATTTGGAAGAGAAGCCTAATCAAACAAGAACCAACTCAAAAAGTGTAGATTCTGCTTCAGATTCTGGTGGTCGTTATATAATGGTGGCAGTGGCTATTGGTTGTTTGGGCATCTTCTTAATGAAGGGTTTGTTAACCTGA 1956 0.3896 MAEDTFGVDSQQKHFGRLKDQVRLVKRKDCERYEVAPIQNKLSFENGFFIVFHSCKLLVQKNDGMLLIGVGGPSGAGKTVFAEKIFNSMPDVAVISMDNYNDSSRIVDGNFDDPRLTDYETLLRNVHDLKAGMPVQVPVYDYKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHLDLIKRVIRDIQRAGQEPQEIIHQISETVYPMYKAYIEPDLQTAHIKINNKFNPFFGFQSPTYILKSTRNVTVDQIKAVLSQNFEETTEQTYDIYLLPPGENPESCQSYLRMRNKDGKYSLMFEEWVTDDPFVISPRITFAVSVRLLGGLMALGYTIATILKRSSHVLSDDRICVKLDWLEQLNRHYVQVQGTDRLVVTHIAKQMGLEGSYVPRTYIEQIQLEKLVMAMPDDLRTKLHLNEDLISSPRAAFLRTSSDRAPMRHIRMRSDISQSCTNHKDENQAKVTAFFSNNRGLRENNNSDSETKQVNQGAITHLSEQISSLHDRMGEFTNRIEELNSKLTIKKNCPSQQNSDSVPTSYFINSLSNGSLNRSIMTNSSFPSQLAKESHLSDEISGIARCQRQIMNQLDNLNNLFCGNLEEKPNQTRTNSKSVDSASDSGGRYIMVAVAIGCLGIFLMKGLLT* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3064 651 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 6 637 - -
Mal5g3064 651 Pfam Phosphoribulokinase / Uridine kinase family 67 237 IPR006083 GO:0005524|GO:0016301
Mal5g3064 651 Pfam CYTH domain 269 404 IPR023577 -
Mal5g3064 651 CDD UMPK_like 67 239 - -
Mal5g3064 651 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Mal5g3064 651 PRINTS Uridine kinase signature 65 82 - -
Mal5g3064 651 PRINTS Uridine kinase signature 224 237 - -
Mal5g3064 651 PRINTS Uridine kinase signature 188 198 - -
Mal5g3064 651 PRINTS Uridine kinase signature 132 147 - -
Mal5g3064 651 PANTHER URIDINE KINASE 6 637 - -
Mal5g3064 651 Coils Coil 508 528 - -
Mal5g3064 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 238 IPR027417 -
Mal5g3064 651 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Mal5g3064 651 Gene3D - 65 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3064 Mal-Chr5 90251574 90257524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3064 66 236 PRT Gene Family AT5G40870 28.889 3.32e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3064 K00876 - gmx:100781286 966.837