Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2991 ATGGAAGAGAGTAATAACTTTGATTTAGCAAGCCTTATGTGCTTCGAAAAATTTGAAAGTGTTGTTGATGGGTCTACTCTTTCATCGGACCACAAAGATATTCATTTTTTGAGTTATGAGAATATTGGATCGCAAAATGTTTTGGGTTTTTTTGTTCTTAGTGATGAAATTGTTTTGCGTTTAGTTCAAAAAGAAAATGAAAATTTGCCTCGCGATGATTATCTCGAGAGGCTTCGTGGCGGGGACATAATCATGAAACTTGGGGACTTGAACTTAAACATGAACAAGAACTTGATTGATATTAGGGATGAAGCTGTTGAAATGATTTGGAAGGCAACTGCATACTATGGTTTTGGAACCTGTTGCCTTTCTCTAGCTGTGAACTACCTGGATCGTTTCCTTTCAATGTACAATTTTGAAAGAGGCTATGATTGGAGTGTGCAATTGTTGGCCTTAGGATGTTTATCAATTGCCGCTAAAATGGAGGAGAGTCAAATATTGCCTAAATTTGAAGACATTGAGTTTGGAGAATCAATGCTTGCATGTGAAACTAAAGGCATGCACAAAATGGAGCTGTTGGTATTAGACCACCTGAATTGGAAAATGCAATCTTCAACTCCATGTTCCTTTGTGGATCATTTTCTTAGAAAGATTACTTCTGAGCAACATCATCCCTCAGAGTTTTCTATGATCGATTCATTAGATCTCTTTCTTGACATAACTAAATGGATTGATTTCTTGGAATTTAGGCCTTCTGAAATTGCTGCAGCAGCTGCAATTTTTGTTTCAAAGGAATTGGAAACAAATGAGATTGATGATGTCTTGACTCGTTTTGCCGTTGTAGAGAAGGACAAAATTTTGAAGTGTCTTGAATTGATGAAAATGTTTGCTTGGGTGGAAGTTTCGGCTGGATTAAGCAGCAACAACTTAGCAACAATTGTGCCTGAAAGCCCTGATGAAGTGATGGATGTTGCATGCTTGAGCTATGAAAGTGAAGAAAATGAAACAACAACAAATGGATCAGAAGCAGTATCTTCTCATGAAGTTCAAATATCAGCAATAGGCACAAGTCCTATCCATGATGATGCAATTTTCTAG 1098 0.3716 MEESNNFDLASLMCFEKFESVVDGSTLSSDHKDIHFLSYENIGSQNVLGFFVLSDEIVLRLVQKENENLPRDDYLERLRGGDIIMKLGDLNLNMNKNLIDIRDEAVEMIWKATAYYGFGTCCLSLAVNYLDRFLSMYNFERGYDWSVQLLALGCLSIAAKMEESQILPKFEDIEFGESMLACETKGMHKMELLVLDHLNWKMQSSTPCSFVDHFLRKITSEQHHPSEFSMIDSLDLFLDITKWIDFLEFRPSEIAAAAAIFVSKELETNEIDDVLTRFAVVEKDKILKCLELMKMFAWVEVSAGLSSNNLATIVPESPDEVMDVACLSYESEENETTTNGSEAVSSHEVQISAIGTSPIHDDAIF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2991 365 SUPERFAMILY Cyclin-like 47 202 IPR036915 -
Mal5g2991 365 PANTHER CYCLINS 48 347 IPR039361 -
Mal5g2991 365 Gene3D - 204 291 - -
Mal5g2991 365 SMART Cyclin_C_2 205 330 IPR004367 -
Mal5g2991 365 Pfam Cyclin, N-terminal domain 98 202 IPR006671 -
Mal5g2991 365 CDD CYCLIN 102 175 IPR013763 -
Mal5g2991 365 SUPERFAMILY Cyclin-like 187 301 IPR036915 -
Mal5g2991 365 SMART cyclin_7 107 196 IPR013763 -
Mal5g2991 365 SMART cyclin_7 213 295 IPR013763 -
Mal5g2991 365 PANTHER CYCLIN-D4-1-LIKE 48 347 - -
Mal5g2991 365 Pfam Cyclin, C-terminal domain 206 297 IPR004367 -
Mal5g2991 365 Gene3D - 101 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2991 Mal-Chr5 88094398 88096714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2991 54 273 Core Cell Cycle Gene Families AT5G65420 44.545 7.98e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2991 K18810 - gmx:100800570 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1579 6 29081020 29081979 Mal5g2991 5 88094398 88096714 PCT