Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2973 ATGGCCAACCTTTCTAATGTGAAAGAAGTAGAAGAAGAATTAGAAGATGAAGAAAGTTTCTTATATGCTACACACCTTGGCAACTCTATTGTGCTACCAATGGCACTACATTCTGCAATTGAGCTTGGTGTTTTTGATGTGTTGCAAAAAGCCGATAAAGGTGCACAACTCTCTGCCGATGAGATTGTGTCTCGAATTTCTTGCATCAATCCGGATGCCGCCAAAATGTTGGATCGAATTCTTGCTCTTCTTGCCTCATACGATGTGTTAAAGTGTTTGGTGATTCAAGATGAACAAAAACTTGGATCCTTTCATAGACTTTATAGTATGACTCATGTTGCTAGATTCTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGATGGCTTTAAGTCAAGATAAGGTTTTCTTAGCTAGCTGGTCCCAGCTTAATGATGCCATTCGAGAAGGTGGTATTCCATTCAATAGGGCTCATGGCACACATGCCTTTGATTATCCAAGTTTGGACTCTAGGTTCAACCAAGTTTTCAACAGAGCAATGATCAATCATACCAAATTAGTCATGAAGAAGGTTCTTGAATGCTACAAAGGTTTCAAGGACATAAAAAAGCTTGTGGATGTTGGAGGTGGTCTAGGGGTTAACATTAACTTGGTCACATCCAAATACCCTCAAATACATGGTATCAATTTTGACTTGCCTCATGTCATTCAACATGCCCCTTCATATCCTGGAGTTGAACACGTTGGCGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCTATCTTTATGAAGTGGATACTACATGATTGGAGCGATGAACATTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATCCCTAATGATGGAAAGGTGATTGTTTTGGAGGCACTTCTTCCTATTATACCTGATAATGGTTATGCTTCGAAATCTACCTCCCAATTGGATGTTATGATGATGACTCAAAATCCAGGAGGAAAAGAGCGAAATAAGCAAGAATTCATGCATTTGGCAACTAAAGTTGGATTTAGTGGCATCAAATATGAATGTTGTGTTCGTAACTTTTGGGTTATGGAGTTCTTTAAGTAA 1098 0.388 MANLSNVKEVEEELEDEESFLYATHLGNSIVLPMALHSAIELGVFDVLQKADKGAQLSADEIVSRISCINPDAAKMLDRILALLASYDVLKCLVIQDEQKLGSFHRLYSMTHVARFFAPNSDGVSLGPLMALSQDKVFLASWSQLNDAIREGGIPFNRAHGTHAFDYPSLDSRFNQVFNRAMINHTKLVMKKVLECYKGFKDIKKLVDVGGGLGVNINLVTSKYPQIHGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPNDGKVIVLEALLPIIPDNGYASKSTSQLDVMMMTQNPGGKERNKQEFMHLATKVGFSGIKYECCVRNFWVMEFFK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2973 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Mal5g2973 365 Gene3D - 2 117 IPR036388 -
Mal5g2973 365 PANTHER O-METHYLTRANSFERASE 7 365 IPR016461 GO:0008168
Mal5g2973 365 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
Mal5g2973 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Mal5g2973 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 363 IPR029063 -
Mal5g2973 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 120 IPR036390 -
Mal5g2973 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Mal5g2973 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Mal5g2973 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2973 Mal-Chr5 87826951 87828981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2973 1 365 Monolignol Biosynthesis Gene Families AT5G54160 50.136 2.32e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2973 K13066 - gmx:100803633 536.569