Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2969 ATGGGCAAAATTGTCTTTTTCAACACAAAAATTTCTATCACTCACTTCAAAAAAATGAAACCGTCGTGTCCATGTAAACAAAAGACTTCCTTTTTACCTTTTTCTCACTTCTTCAGAACCTCTGCCAACGCTGAAGGAAAACAAAGTTCAAACTCTGTCAACAACGGTTTCTTCTTCTCCGATCGGGTTTATGAAATGGATCCTCCACCTCCAGCAATCAGTGTTACTCATTCAGTTGAGAGTTGTTTGACCGACGATGACATTGAAACGTCCTTTAAACCATCTCATCCAATTGCTGCTAAAATCCCTGAACCTTATCAACATCTCAATGTATCTGATGATGAAATAGAACCACGAAATGAGGGTTGGGAACTCACTGTCAGCAATACTTTAGTACAGAGATGTAACCCACTGTATATACCAAGAGGGATTGTGGGTGAACATAAGATGGTTTTCCGGACAAAGGTTATATTGAAGGATGAACTTGGAAATTCATTCAATTGCAGGATAAAGAAGGCCAAAAGAAGAAGACATAGAGAATGGTACTTATGTAATGGTTGGTACCAATTTGCAAGACAGCAGAGGTTGCAGGAAGGTGATAAGCTTCAGTTTGTGGTTCATCAACAAGGTCCTCCGTATCATGTTAGGGTCAACATTGTAAGGCGTTTAATGGATTGA 678 0.3938 MGKIVFFNTKISITHFKKMKPSCPCKQKTSFLPFSHFFRTSANAEGKQSSNSVNNGFFFSDRVYEMDPPPPAISVTHSVESCLTDDDIETSFKPSHPIAAKIPEPYQHLNVSDDEIEPRNEGWELTVSNTLVQRCNPLYIPRGIVGEHKMVFRTKVILKDELGNSFNCRIKKAKRRRHREWYLCNGWYQFARQQRLQEGDKLQFVVHQQGPPYHVRVNIVRRLMD* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2969 225 Gene3D - 106 223 IPR015300 -
Mal5g2969 225 CDD B3_DNA 126 204 IPR003340 GO:0003677
Mal5g2969 225 Pfam B3 DNA binding domain 133 210 IPR003340 GO:0003677
Mal5g2969 225 ProSiteProfiles B3 DNA-binding domain profile. 123 221 IPR003340 GO:0003677
Mal5g2969 225 SUPERFAMILY DNA-binding pseudobarrel domain 119 210 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2969 Mal-Chr5 87789550 87792547 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal5g2969 B3 6.9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2969 - K19475 mtr:MTR_0010s0310 46.2098