Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2967 ATGAATATGATCAGTTCAACATGCTTTCATGTTTTCATTCTCTTTGCTGCTACACTAACACTACAGAATACTGCTAGTGCCTTAGGAAATGAAACAGACCAATTATCATTACTAAGATTCAAAGAAACAATATTAGATGACCCTTTAGATATCGTGAAATCTTGGAATACTTCAACTTCATTTTGCAACTGGCATGGAGTCAAATGCAGCCTCAAACATCAAAGGGTCACTTCTTTGAACCTACAAGGGTATGGCTTACTTGGATTGATACCACCTGAAATTGGAAATCTCACTTTTCTAAGGTATGTTAACCTTCACAACAATAGCTTCTATGGTGAAATCCCACAAGAAATAGGTCATTTGTTTAGGCTAGAGGAGCTTTATCTGACCAATAACACATTCAAGGGTCAAATTCCTACCAACTTGTCTAGTTGTTCTGAACTCAAGAGCTTGAGTTTAACAGGAAACAAACTAGTTGGAAAAATACCAAAGGAGCTTGGTTATCTAACTAAGCTAGAAATTCTATCTATTGGTATGAATAATTTGAGTGGTGAAATCCCTGCATCTATAGGAAATCTTTCATCTCTTAGTGTTCTCGTTTTAGGAATCAATAATTTTGAAGGAAATTTACCTGAAGAGATAGGCCATTTGAAAAACTTGAAACGTATCTCTATTGCATCAAACAAACTATATGGTATGCTTCCTTTTACATTATTTAATATGTCATCTCTCACTTTCTTCTCATCTGGTGTCAACCAATTTAATGGCTCTTTACCTTCCAACATGTTCCTCACACTCCCTAATCTCCAACAATTTGGCATTGGTATGAATAAGATCTCGGGTCCTATACCGATTTCAATATCAAATGCGACAAATTTGTTGTTATTTAACATCCCTAGGAATAACTTTGTTGGACAGGTTCCAACTGGAATAGGAAATCTCAAAGATATTTGGTCCATTGCTATGGAATATAATCATCTAGGGAGTAATTCATCCAAGGACTTGGATTTCTTGACATCTTTGACAAACTGCACAAATTTACAAGTGTTGGATTTAAATCTAAACAACTTTGGTGGTTCTTTACCAAACTCTGTAGCTAACTTTTCAGATCAATTGAATCAGTTTTATATTGGTGGAAATCAGATTACTGGAACAATTCCTGCAGGATTAGGAAATCTCATTAACTTGATTGGCTTTGACTTAGAGTTCAACCTTCTATCAGGCTCCATTCCAACTTCTTTTGGAAATTTTAGAAAGATACAATCATTGACATTGAATGTAAACAAACTTTCAGGAAAGATTCCATCATCACTTGGTAACCTTAGTCAGTTATTTCAACTTGACTTATCAAATAATATGCTAGAAGGAAACATTCCTTCAAGTATTGGAAATTGCCAAATGCTACAATACTTGGCTCTTTCGAATAACAACCTTAGTGGAACCATTCCTTCTCAAATAATTGGTCTTCCCTCTTTGTCATTGTTACTCAACTTATCCCATAATTCATTAAATGGAAGCTTACCCTTTGAAATTGGCAACCTGAAAAGCATAAATAAGTTGGATGCTTCTAAAAACTTTCTGTCTGGTGAAATTCCTGCAACAATTGGACAATGCATGAGTTTGGAATACCTTAACTTGCAAGGGAATTTTTTCGAAGGAGCCGTGCCTTCGTCTTTGGCTTCATTGAAAGGCCTTCAATATTTAGATTTGTCACAAAACAACTTATCAGGGTCAATTCCAGAAGGTCTAGAGAGTATTCCTGTTCTACAGTACTTGAATATTTCTTTTAACAGGTTGAAGGGTGAGGTACCAACAGAAGGTGTGTTTAGAAATGAAAGTGCAATATCTTTGAAAAACAATAGTGATCTTTGTGGTGGTATCACAGGGTTACATCTACAACCATGTGTTGTCAAAGTTAAGACACACAAAAACCAAAAGGCCTTGAAGATAATAGTAATAACAATTTTTGTGGTTTTTTTTCTTCTTCTGTTATCTTTCTCTATTGCAGTCTTTTTGAAGAAGAAAAATATACACTGGAGAGCTTCCAATTTACCACCAACAATAGATAACCTTGCAAAGGTCTCATACAAAGCACTTTATCAAGCAACAAATGGATTCTCTTCCAACAACTTGATAGGATCTGGTGGTTTTGGATTGGTGTATAAAGGATTTCTTGAGTCAGATGAAAGAGTTGTTGCTATAAAGGTCTTGAACCTTCAAGTCAAGGGAGCGCACAAGAGTTTCATCGCTGAATGTAATGCACTCAAAAGTATCCGTCATAGGAAACTTGTCAAGATTCTAACATGTTGCTCAAGTATGGATTACAATGGAGATGAATTCAAAGCTTTAGTTTTTGAGTACATGGAAAATGGAAGCTTGGATAAATGGCTGCATCCTGATTTCGATATCGGAGATCAACCAAGTTTAAACCTTCTTCAAAGACTAAATATTCTCACAGATGTTGCTTCTGCAATACACTATCTGCACTATGAATCTGAGCAGCCGGTCATTCATTGTGATTTAAAGCCAAGCAATATCCTTCTTCATAATGATATGGTTGCTCATGTGAGTGATTTTGGACAAGCAAGACTTCTATATGCCATCAATGGTATCTCGGATCTACAGACTAGCACAATTGGATTCAACGGAACAATTGGATATGCTCCTCCAGAATATGGAGTGGGATGTCAAGTTTCAACACAGTGTGATGTGTATAGTTTTGGAATCCTTTTACTCGAAATTCTAACAGGAAGAAAACCAACAGATGAAATATTTACAAATGGTATGAATCTTCATTCTTTTGTCAAGGTTTCACTGCCAGACAGATTCCTAGAGATAGTAGACTCAACTCTACTTCCAAGAGAACTAAAACAAACAACTGTATCAACAACAACTGAAGAAGAAAAAAATAATAGCAATGATCAGAACCAAAGCCACTTGTATCCCAATGATCTGAAGCAGTGTTTACTTGAACTCTTTAATATTGGACTTGCTTGTTCAGTAGAGTCACCAAGAGAGAGAATAAACATGAAGGATGTCACAAGGGAGTTAGATGTAATTAAAATTGCTCTTTCTAGGATGTAG 3084 0.3573 MNMISSTCFHVFILFAATLTLQNTASALGNETDQLSLLRFKETILDDPLDIVKSWNTSTSFCNWHGVKCSLKHQRVTSLNLQGYGLLGLIPPEIGNLTFLRYVNLHNNSFYGEIPQEIGHLFRLEELYLTNNTFKGQIPTNLSSCSELKSLSLTGNKLVGKIPKELGYLTKLEILSIGMNNLSGEIPASIGNLSSLSVLVLGINNFEGNLPEEIGHLKNLKRISIASNKLYGMLPFTLFNMSSLTFFSSGVNQFNGSLPSNMFLTLPNLQQFGIGMNKISGPIPISISNATNLLLFNIPRNNFVGQVPTGIGNLKDIWSIAMEYNHLGSNSSKDLDFLTSLTNCTNLQVLDLNLNNFGGSLPNSVANFSDQLNQFYIGGNQITGTIPAGLGNLINLIGFDLEFNLLSGSIPTSFGNFRKIQSLTLNVNKLSGKIPSSLGNLSQLFQLDLSNNMLEGNIPSSIGNCQMLQYLALSNNNLSGTIPSQIIGLPSLSLLLNLSHNSLNGSLPFEIGNLKSINKLDASKNFLSGEIPATIGQCMSLEYLNLQGNFFEGAVPSSLASLKGLQYLDLSQNNLSGSIPEGLESIPVLQYLNISFNRLKGEVPTEGVFRNESAISLKNNSDLCGGITGLHLQPCVVKVKTHKNQKALKIIVITIFVVFFLLLLSFSIAVFLKKKNIHWRASNLPPTIDNLAKVSYKALYQATNGFSSNNLIGSGGFGLVYKGFLESDERVVAIKVLNLQVKGAHKSFIAECNALKSIRHRKLVKILTCCSSMDYNGDEFKALVFEYMENGSLDKWLHPDFDIGDQPSLNLLQRLNILTDVASAIHYLHYESEQPVIHCDLKPSNILLHNDMVAHVSDFGQARLLYAINGISDLQTSTIGFNGTIGYAPPEYGVGCQVSTQCDVYSFGILLLEILTGRKPTDEIFTNGMNLHSFVKVSLPDRFLEIVDSTLLPRELKQTTVSTTTEEEKNNSNDQNQSHLYPNDLKQCLLELFNIGLACSVESPRERINMKDVTRELDVIKIALSRM* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2967 1027 PANTHER OS04G0122200 PROTEIN 19 1023 - -
Mal5g2967 1027 Pfam Protein kinase domain 708 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2967 1027 SMART LRR_typ_2 121 145 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 169 193 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 97 120 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 217 241 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 586 611 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 441 465 IPR003591 -
Mal5g2967 1027 SMART LRR_typ_2 562 585 IPR003591 -
Mal5g2967 1027 SUPERFAMILY L domain-like 31 327 - -
Mal5g2967 1027 SUPERFAMILY Protein kinase-like (PK-like) 685 1018 IPR011009 -
Mal5g2967 1027 Gene3D Ribonuclease Inhibitor 333 635 IPR032675 -
Mal5g2967 1027 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mal5g2967 1027 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Mal5g2967 1027 SMART serkin_6 706 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2967 1027 MobiDBLite consensus disorder prediction 959 979 - -
Mal5g2967 1027 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Mal5g2967 1027 SUPERFAMILY L domain-like 372 625 - -
Mal5g2967 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Mal5g2967 1027 Gene3D Phosphorylase Kinase; domain 1 687 787 - -
Mal5g2967 1027 ProSiteProfiles Protein kinase domain profile. 706 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2967 1027 PANTHER LRR RECEPTOR-LIKE KINASE 19 1023 - -
Mal5g2967 1027 Gene3D Ribonuclease Inhibitor 208 327 IPR032675 -
Mal5g2967 1027 Gene3D Ribonuclease Inhibitor 28 207 IPR032675 -
Mal5g2967 1027 Gene3D Transferase(Phosphotransferase) domain 1 788 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2967 Mal-Chr5 87769045 87772444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2967 30 1021 Receptor kinase-like Gene Family AT3G47570 45.962 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal5g2967 Pkinase 8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2967 - - gmx:100786600 1080.09