Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2963 ATGGAGAGATTAGAGAGAAGGAACAAGAGGGATCAAGAAAAGAAAGAAAGGAGATGGAGAAACTCGAAAATGGTGGAATTAATAACGGGTAATAACAATAATGCAAAGAAAGAGTTTGGTTTTTCAAATGACAACAACAATGATATATCAATAGGGTCACCAATACCATCACCAAGAGGTGTATTTGAGGTACCGATTTCGGATTCCGATAGCACGGGAAGCAGCAACTGCAGCAGTTCTGGTGGGACATCAAAGCGGCCGCCATCATCATCATCATCATCACCAAATGGAGGAGGAGATGGAGGGCACCAATGGAGGGCTATGATTGATGCATTGAGGTTTAAGTCTGTGAGGAGATTTTCAACCATTCCTTTGCTTGCAGCTAGCTATGAAATTTCTAGGAGGAGTTTGAGGAACAAGTTGGCTAGGAGAACATCTAATGAGGATGATGAGAATGATTTTGATGGTGCTTTTGATCTTGATGGTATAACTAAGCCTTCTTGGAGAAACTTTAGTTATGAAGATCTTGCTGCTGCAACTGACAATTTTAATCCTGAGAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTATCAAGGACGGTTACCAGATGGAAGAGTTGTAGCAGTTAAGAGGCTAATGAAGAATGAAGAAGAAGTTGGAGACAAAGCTGGTGATTTCTTGTCAGAACTTGGGATTATTGCTCACATTAACCATCCAAATACAACACGTCTCATTGGTTTTGGAATTGACCGTGGCCTCTACTTTGTTCTACAATTTGCTTCACATGGAAGCCTTTCCTCTATGCTCTTTGGTTCTGAAAGTTTGGAATGGAAGATAAGGTTCAAAGTAGCACTTGGAGTAGCCAAAGGTTTGCAGTATCTCCATCAAGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCATAATCATGAAGCTGAGATTTCAGATTTTGGTTTGGCAAAGTGGCTTCCAGATAAATGGGCACACCATGTTGTTTTTCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTCATGCATGGAATTGTGGATGAAAAGACTGATGTTTTTGCATTTGGTGTATTGTTACTTGAACTCATGACAGGTCGTCGTGCCGTTGATTCAAATAGTAGGCAAAGTCTTGTGATTTGGGCTAAACCATTATTGGATGCAAAGCAAGTGAAGGAAATAGCAGATCCAAGATTAGAAGATCAATATGATCCAATTGAAATGATGCTTGCCATGGCAACAGCTTCAATGTGTATCCATCACATTTCCTCTAAAAGACCATTCATGAATCAGGTTGTGCTATTATTGAAAGGAGAAGAGGTGGCTATGGATCTCACACAAAAATCAATAGCTCCAAGGTCTCAACATTTATGTGAAAACATTCTCAAAATAGAGGAGTCTACATGA 1449 0.3996 MERLERRNKRDQEKKERRWRNSKMVELITGNNNNAKKEFGFSNDNNNDISIGSPIPSPRGVFEVPISDSDSTGSSNCSSSGGTSKRPPSSSSSSPNGGGDGGHQWRAMIDALRFKSVRRFSTIPLLAASYEISRRSLRNKLARRTSNEDDENDFDGAFDLDGITKPSWRNFSYEDLAAATDNFNPENMIGKGGHAEVYQGRLPDGRVVAVKRLMKNEEEVGDKAGDFLSELGIIAHINHPNTTRLIGFGIDRGLYFVLQFASHGSLSSMLFGSESLEWKIRFKVALGVAKGLQYLHQDCPRRIIHRDIKASNILLNHNHEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELMTGRRAVDSNSRQSLVIWAKPLLDAKQVKEIADPRLEDQYDPIEMMLAMATASMCIHHISSKRPFMNQVVLLLKGEEVAMDLTQKSIAPRSQHLCENILKIEEST* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2963 482 Gene3D Transferase(Phosphotransferase) domain 1 262 467 - -
Mal5g2963 482 Pfam Protein kinase domain 186 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2963 482 SUPERFAMILY Protein kinase-like (PK-like) 167 452 IPR011009 -
Mal5g2963 482 PANTHER OS08G0249100 PROTEIN 1 471 - -
Mal5g2963 482 MobiDBLite consensus disorder prediction 67 99 - -
Mal5g2963 482 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Mal5g2963 482 SMART serkin_6 183 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2963 482 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 471 - -
Mal5g2963 482 ProSiteProfiles Protein kinase domain profile. 183 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2963 482 MobiDBLite consensus disorder prediction 25 53 - -
Mal5g2963 482 MobiDBLite consensus disorder prediction 1 23 - -
Mal5g2963 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Mal5g2963 482 MobiDBLite consensus disorder prediction 1 104 - -
Mal5g2963 482 Gene3D Phosphorylase Kinase; domain 1 159 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2963 Mal-Chr5 87620505 87624149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2963 171 446 Trihelix Transcription Factor Family AT1G68690 45.486 3.84e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal5g2963 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2963 - - gmx:100794225 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0027 6 399408 404535 Mal5g2963 5 87620505 87624149 PCT