Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2950 ATGGCGATTTCACCAGAGATGGAGCATCCCAGAAAGGCTTTTGGATTGGCAGCTAGGGACTCATCTGGAGTTGTCTCTCCTTTCAACTTCTCAAGAAGGGGAACCGGAGAGAAAGATGTAAGATTCAAAGTGCTATATTGTGGTATATGCCACTCAGATCTTCACATGTTGAAGAATGAATGGGGCAATTCTGTTTACCCCTTAGTGCCTGGGCATGAGTTTGTAGGTGAAGTAACAGAGGTAGGAAACAAGGTACAAAAATTCAAAGTTGGAGACAAGGTAGGTGTTGGGTGTCTGGTTCAATCATCGATTGGAACATATAGTGCCAAGTATCTTGATGGCACCATCACATATGGAGGCTACTCCAACACAATGGTTGTCGACGAAAGCTTTGTGCTCAACATTCCAAATGAGTTACCACTTGATGCCGCCGCTCCTCTCCTTTGCGCCGGGATCACGGTGTATAGCCCTTTGAGATATTTTGGGCTTGATAAGCCAAACTTGCAATTGGGTGTGGTTGGGCTTTGTGGGCTTGGCCATATGGCTGTTAAATTTGCCAAAGCTTTTGGTGCTAAGGTAACGGTGATTAGCACTTCTCCTAACAAAAAGAAGGAAGCTATCGAAATTCTTGGAGCTGACTCATTTGTGCTTAGCACTGATCAAGATCAAATGCAGGCTGTAATTGGAACTTTGGATGGCATCATTGACACAGTTTCTGCCGTCCATCCTCTGTTACCTTTGATTGGTCTTTTGAAGTCTCATGGAAAACTTGTTATGGTTGGTGCACCTGAGAAGCCTCTAGAGCTACCAGTATTTCCTTTACTTTTGGGGAGAAAGATAATAGGAGGAAGTTGCATTGGAGGAATTAAAGAGACACAAGAAATGATTGATTTTGCTGCTAAACATGATGTGAAACCCGAAATTGAAGTTATTCCTGCTGATTATGTGAACACTGCAATGGAACGTCTCCTTAAAGCAGATGTCAAATATCGATTTGTTATTGATATTGGGAACACATTGAAACCAAGCTCTTAA 1035 0.4271 MAISPEMEHPRKAFGLAARDSSGVVSPFNFSRRGTGEKDVRFKVLYCGICHSDLHMLKNEWGNSVYPLVPGHEFVGEVTEVGNKVQKFKVGDKVGVGCLVQSSIGTYSAKYLDGTITYGGYSNTMVVDESFVLNIPNELPLDAAAPLLCAGITVYSPLRYFGLDKPNLQLGVVGLCGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEILGADSFVLSTDQDQMQAVIGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLLGRKIIGGSCIGGIKETQEMIDFAAKHDVKPEIEVIPADYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2950 344 Gene3D - 17 336 - -
Mal5g2950 344 Pfam Zinc-binding dehydrogenase 177 300 IPR013149 -
Mal5g2950 344 PANTHER ALDEHYDE REDUCTASE 1 343 - -
Mal5g2950 344 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mal5g2950 344 CDD CAD1 14 335 - -
Mal5g2950 344 Gene3D - 150 306 - -
Mal5g2950 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 305 IPR036291 -
Mal5g2950 344 SUPERFAMILY GroES-like 20 166 IPR011032 -
Mal5g2950 344 Pfam Alcohol dehydrogenase GroES-like domain 38 104 IPR013154 -
Mal5g2950 344 SMART PKS_ER_names_mod 23 334 IPR020843 GO:0016491
Mal5g2950 344 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2950 Mal-Chr5 87490573 87496012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2950 11 343 Monolignol Biosynthesis Gene Families AT4G37990 69.143 9.20e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2950 - K23232 gmx:100816901 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0757 6 11190664 11199871 Mal5g2950 5 87490573 87496012 PCT