Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2946 ATGATGAAGATGAGAGTGTTGAGTAAGAAGAGCAAACAAGTTATCTTCTTTTGGTGGTTTGGAATGATTTTGCAACTCTGTTTCTTGCTATGTGCTTGTTCTAAAAAGACATCATTAAGAGGAGGATCAAAGAAGATCAATAGCATGGAATCAAAATCTATAGTCAAACTGAAGACAGAAAACAAACAGTTGGTTGTTGACAATGGCATTGTCTCTGTGTCTTTGTCAAGACCTGAGGGGTATGTCCTTGGAATATCGTATAATGGAATTGACAACATTCTTGATTCTGAAAACAAAGAACTAGATAGAGGGTACTTCGACGTTGTTTGGAATCAACCAGGAGAGCAAAATCTTAATAATAGTATTTTCCAGAGAGTCCATGGGACAAACTTTTCAGTTATAGCAGCTGATGAGAATATGGTGGAGCTTTCATTTTCAAGACCATGGACACCTTCCATGAGTGGCACAAATGTCCCCATAAACATAGATATAAGATACATTTTCAGAAGTGGTGATTCAGGATTTTATTCATACGCAATATTCAATCGACCCAAAGGAATGCCAGGAGTTGAGGTTGATCAAATTAGATTTGTTTACAAACTCAATAAAGACAGGTTCAAGTACATGGCATTATCTGATACAAGGCAAAGAAACATGCCAGCAATGAAAGATAGGGAAACAGGTCAAGAACTAGCTTACCCTGAAGCAGTTCTATTAACGAAACCAATTAACCCACAATTTAGAGGAGAGGTGGATGATAAATATCAATACTCATGTGAGAATATAGATAACACTGTTCATGGTTGGATTAGTTTTGATTCTGATCCACCCGTGGGCTTTTGGATGATAACACCAAGTAATGAATTTCGCAATGGTGGGCCCATTAAACAAGATCTTACTTCTCATGTCGGACCCATCACTCTATCGATGTTTGTGAGCACCCACTATGCTGGAAAGGAAGTAACCATGGCATTTAAAAAAGGAGAGACCTATAAAAAGGTTTTTGGCCCTGTATTTGTCTACCTTAACACTGCTTCAAGCAAGAATGATAATCTAACCCTCTGGTCAGATGCTGTGAAACAGTTATCCAAGGAAGTCCAAAGTTGGCCTTATGATTTTCCTAAATCACAAGATTACTTTCTACCTACACAACGAGGAGCAGTATTTGGAAGACTACTAGTCCAAGATTGGTACTTCAAAGGAGGAAGGGTTCAATATGCTAATAATGCTTATGTGGGTCTAGCTTTGCCTGGATATCCAGGCTCATGGCAGAGAGAAAGCAAGGGCTATCAATTTTGGACTCAAACTGATGTCAAGGGATACTTTAAAATAACCAATGTTGTGCCAGGTCACTATGATTTGTATGGTTGGGTCTCTGGATTCATTGGTGATTACAAATATAATAGTACAATCACCATCACCCCAGGAGGAGTCATAAAATTAAATTCACTTGTATATAATCCTCCTAGAAATGGACCAACCATTTGGGAAATTGGTATTCCAGATCGTTTGACTTCAGAATTTCATATACCAAACCCTTACCCTAATCTCCTGAACAAATTATACCCTAAACAAGGCAAAGACAAGTTTAGACAATACGGGTTGTGGGAACGATACAAAGAAATATATCCAAATAGTGACCTTGTTTACATTGTGGGTGTTAACAAGTACTATAGAGATTGGTTTTACGCTCATGTTACAAGAAACATAGAAAATAATACATATGCGCCAACAACATGGCAAATTATATTTGAACAACATGACTTAATGAGTGGAAACTACACACTACAACTTGCCTTGGCTAGTGCTGCTGATGCTTACCTACAGGTTCGGTTCAATGACCAAAGCGTATATCCACCCCACTTTGCAACAGGACATATAGGAAGAATCTTTGGAGACAATGCCATAAAAAGGCATGGAATTCATGGATTGTATTGGTTGTTCAGCATTGATGTGCCAGGTCATCTTCTTTTGAAAGGAAAGAATATCATTTATCTAAGGCAGACCAATGCTGATACTGCTTTCCAAGGAGTTATGTATGATTATATCCGTTTAGAACGACCACCAATAACTTGA 2076 0.3805 MMKMRVLSKKSKQVIFFWWFGMILQLCFLLCACSKKTSLRGGSKKINSMESKSIVKLKTENKQLVVDNGIVSVSLSRPEGYVLGISYNGIDNILDSENKELDRGYFDVVWNQPGEQNLNNSIFQRVHGTNFSVIAADENMVELSFSRPWTPSMSGTNVPINIDIRYIFRSGDSGFYSYAIFNRPKGMPGVEVDQIRFVYKLNKDRFKYMALSDTRQRNMPAMKDRETGQELAYPEAVLLTKPINPQFRGEVDDKYQYSCENIDNTVHGWISFDSDPPVGFWMITPSNEFRNGGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMAFKKGETYKKVFGPVFVYLNTASSKNDNLTLWSDAVKQLSKEVQSWPYDFPKSQDYFLPTQRGAVFGRLLVQDWYFKGGRVQYANNAYVGLALPGYPGSWQRESKGYQFWTQTDVKGYFKITNVVPGHYDLYGWVSGFIGDYKYNSTITITPGGVIKLNSLVYNPPRNGPTIWEIGIPDRLTSEFHIPNPYPNLLNKLYPKQGKDKFRQYGLWERYKEIYPNSDLVYIVGVNKYYRDWFYAHVTRNIENNTYAPTTWQIIFEQHDLMSGNYTLQLALASAADAYLQVRFNDQSVYPPHFATGHIGRIFGDNAIKRHGIHGLYWLFSIDVPGHLLLKGKNIIYLRQTNADTAFQGVMYDYIRLERPPIT* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2946 691 Pfam Rhamnogalacturonate lyase family 52 251 IPR010325 -
Mal5g2946 691 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 57 689 - -
Mal5g2946 691 SUPERFAMILY Galactose-binding domain-like 491 686 IPR008979 -
Mal5g2946 691 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 57 689 - -
Mal5g2946 691 Pfam Polysaccharide lyase family 4, domain III 494 685 IPR029411 -
Mal5g2946 691 SUPERFAMILY Galactose mutarotase-like 59 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mal5g2946 691 Gene3D - 491 686 - -
Mal5g2946 691 SUPERFAMILY Starch-binding domain-like 401 483 IPR013784 GO:0030246
Mal5g2946 691 CDD RGL4_N 55 350 - -
Mal5g2946 691 Gene3D - 383 483 - -
Mal5g2946 691 Gene3D - 55 362 IPR014718 GO:0030246
Mal5g2946 691 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Mal5g2946 691 CDD RGL4_M 384 484 IPR029413 -
Mal5g2946 691 CDD RGL4_C 496 686 - -
Mal5g2946 691 Pfam Polysaccharide lyase family 4, domain II 408 480 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2946 Mal-Chr5 87407106 87426675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2946 53 688 Polysaccharide Lyase AT1G09890 54.361 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2946 K18195 - gmx:100776664 1023.85