Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2911 ATGGATGAAGTGGGTAGTACAAGCTGTGAGTGGATTAGAGAGCAGAATAAAGCATTTGAAAAAGCATTGGCAATTCATTCTGAGGACGATGTGAATCGATGGGAGAAAATTGCGGCCGATGTGCCGGAGAAAACTTTAGAAGAGATTAAACATCACTATGAGCTTTTGGTTGAAGATATCCACAAGATTGAATCTGGTTATGTGCCTCTAGCGAATTATGAATCTTGTCTAGAGAGCTCAAACTCAACAAAGCGTGCTAGTGAAGGAGCTGCTGTCAAAAAGAGAACTAAGGCTTCCGGTTCTTATCATTGGACAAAAGAAGAACACAGGTTATTTCTTGTGGGCTTGGATAAATATGGAAAGGGTAACTGGAAAAGTATATCAATGAACTATGTGACGACAAAAACACATACACAAGTAGCAAGCCATGCTCAGAAATACTTCATGCATCGAAATTCATTGAAAGAGAAGAAAGAAAGAAAGAAAGAAGCGATCCAGCATACATGA 507 0.3925 MDEVGSTSCEWIREQNKAFEKALAIHSEDDVNRWEKIAADVPEKTLEEIKHHYELLVEDIHKIESGYVPLANYESCLESSNSTKRASEGAAVKKRTKASGSYHWTKEEHRLFLVGLDKYGKGNWKSISMNYVTTKTHTQVASHAQKYFMHRNSLKEKKERKKEAIQHT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2911 168 ProSiteProfiles SANT domain profile. 99 152 IPR017884 -
Mal5g2911 168 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 152 IPR017930 -
Mal5g2911 168 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 3 165 - -
Mal5g2911 168 ProSiteProfiles Myb-like domain profile. 104 148 IPR001005 -
Mal5g2911 168 CDD SANT 10 57 IPR001005 -
Mal5g2911 168 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 165 IPR043363 -
Mal5g2911 168 Gene3D - 100 154 - -
Mal5g2911 168 ProSiteProfiles Myb-like domain profile. 11 57 IPR001005 -
Mal5g2911 168 CDD SANT 104 148 IPR001005 -
Mal5g2911 168 SMART sant 100 150 IPR001005 -
Mal5g2911 168 SMART sant 7 59 IPR001005 -
Mal5g2911 168 SUPERFAMILY Homeodomain-like 99 152 IPR009057 -
Mal5g2911 168 SUPERFAMILY Homeodomain-like 10 64 IPR009057 -
Mal5g2911 168 Gene3D - 5 70 - -
Mal5g2911 168 Pfam Myb-like DNA-binding domain 104 148 IPR001005 -
Mal5g2911 168 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 102 150 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2911 Mal-Chr5 86608087 86609417 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g2911 Myb_DNA-binding 7.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2911 - - mtr:MTR_8g063870 214.927