Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2901 ATGGCATCATCATCATCTCAAAACTTTGCATCCAATTTAACTGCTCTTGTTGTGGATGATCATCCAATGACCCAAAAAATTCATCAAATGACGTTGACTAGCTTAGGAGTTAAATGCACATGTGTGAAAGATGGAAAAGAAGCTGTGGAAATTCATCAGCATGGTAAAAAATTTGACCTAATCCTCATGGATAGGGATATGCCTGAGATGAATGGAATTGAGGCAACAAAGGAACTACGGTTGATGGGGATATCTAGCACTATTGTTGGTTTGTCATCACACTCTATGGAAGAGGAGGAAATAGTGGTCAAATTTATGGAAGCAGGACTCGACGATTATCTAGAGAAACCATTGAATAAGGCAAAACTCAAATCTATTCTTCAGAAGATTCAAATCCAAAATTGA 405 0.3753 MASSSSQNFASNLTALVVDDHPMTQKIHQMTLTSLGVKCTCVKDGKEAVEIHQHGKKFDLILMDRDMPEMNGIEATKELRLMGISSTIVGLSSHSMEEEEIVVKFMEAGLDDYLEKPLNKAKLKSILQKIQIQN* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2901 134 Pfam Response regulator receiver domain 16 127 IPR001789 GO:0000160
Mal5g2901 134 ProSiteProfiles Response regulatory domain profile. 14 131 IPR001789 GO:0000160
Mal5g2901 134 CDD REC_hyHK_CKI1_RcsC-like 16 127 - -
Mal5g2901 134 SMART REC_2 13 127 IPR001789 GO:0000160
Mal5g2901 134 Gene3D - 1 134 - -
Mal5g2901 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 133 - -
Mal5g2901 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 133 - -
Mal5g2901 134 SUPERFAMILY CheY-like 11 130 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2901 Mal-Chr5 86336941 86337447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2901 13 123 Response Regulator Gene Family AT3G04280 47.321 2.72e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g2901 Response_reg 5.3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2901 - - gmx:100794931 149.443