Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2900 ATGGCTATACCGAAATTGGTTCCGGGATTTCGATTCTCTCCAACTGGAGTTGAATTGATTAAGTACTTTCTCAAAAGGAAAGTGATGGGGAAAAAGATTCATGATCATGTCATTGCTGAACTTGACATATACAAATTCGCTCCTTGGGATCTCCCAGATTTATCTTATCTGAAAAATGGCGATTTGGAATGGTACTTCTTCTGTCCGATAGAGAAGAAGTATGGAAGTGGGCCGAGGATGAATCGAGCTACGGAAATTGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACACAATAATCAAACTGTGGGGATGATTAAAACTCTGATATTTCACACTGGGAAAGCACCTCGTGGGGATCGTACTGATTGGGTTATGCATGAGTATAGACTCGAAGATAAGGACTTGACTGACAAAGGAATTGTTCAGGATTCCTACGTTCTCTGTAAGGTATTTCAAAAGGAAGGTCTTGGTCCCAGGAATGGTGCGCAATACGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCTTTTGCTGAGTCGGTTGCACTTGTTCCCACTTTGCCTGTGACACCTAATAGTATTGTTCTAAATGACCAGAATCTCCATGCTAGTGGATATAATGGTTCAATATCCATGCCATGTCAATCAGGATTGGTGCCTTCTCCCGGCCCTGCAAATTCATGTCAAACAGGAGTTCTGCCTTCTCCTGACCCTGCAAATTCATGTCAAACAGGATTGCTGCCTTCTCCCAACCCTGCAAATTCATGTCAAACGAGATTGCTGCCTTCTCCCGACCCAGCAAATTCATGTCAAACAGGAGTTTCGCATTCTCCCTACCCTGCAAATTCATGTCAAACGGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGACCCTTCGAATTCATGTCAAACAGGGTATATGCCGTCTCCCGACCCTGCAAATGCATGTCAAACAGGATTGGTGCTGTCTCCCGACCCTGCAAATTCATGTCAAACAGGATTGGTGCCGTCTCCCGACCCTGCAAATTCATGTAAAACAGGATTGGTGCCTTCTCCCAACCCTGTGAATCATTCATATCTAGAAAATCAAGCTGTTAATGATGATGATGATATTTTATCAATGCTTGATATTTTCAAAGACGACGACATATTGCCTGAGGAAAACATTGCTGAAGGTGCACTATCAACTGACTTTTTTGAGGGTTTGGGAGACCTGGATCGCTCGGCTGTGTTGGGACCCGTTGGCCAGAATGCTGACTTTAGCACATACGGAATGGCTTCTACAACTGATGTTTTGGGGCATGACTACTTGGATTACATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTACTGCTGAACCTGATAGTTGGACTCGGAATAAATAA 1491 0.442 MAIPKLVPGFRFSPTGVELIKYFLKRKVMGKKIHDHVIAELDIYKFAPWDLPDLSYLKNGDLEWYFFCPIEKKYGSGPRMNRATEIGFWKATGKDRAVQHNNQTVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDKGIVQDSYVLCKVFQKEGLGPRNGAQYGRPFNEEDWSDDEVGIPFAESVALVPTLPVTPNSIVLNDQNLHASGYNGSISMPCQSGLVPSPGPANSCQTGVLPSPDPANSCQTGLLPSPNPANSCQTRLLPSPDPANSCQTGVSHSPYPANSCQTGFMPSPDPSNSCQTGYMPSPDPSNSCQTGYMPSPDPSNSCQTGYMPSPDPANACQTGLVLSPDPANSCQTGLVPSPDPANSCKTGLVPSPNPVNHSYLENQAVNDDDDILSMLDIFKDDDILPEENIAEGALSTDFFEGLGDLDRSAVLGPVGQNADFSTYGMASTTDVLGHDYLDYMELIDLDSEMFWQSTAEPDSWTRNK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2900 496 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Mal5g2900 496 PANTHER PLANT NAC DOMAIN PROTEIN 346 480 - -
Mal5g2900 496 PANTHER PLANT NAC DOMAIN PROTEIN 1 240 - -
Mal5g2900 496 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mal5g2900 496 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 346 480 - -
Mal5g2900 496 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 240 - -
Mal5g2900 496 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Mal5g2900 496 MobiDBLite consensus disorder prediction 231 282 - -
Mal5g2900 496 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2900 Mal-Chr5 86316216 86318839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2900 1 247 NAC Transcription Factor Family AT5G09330 53.785 1.01e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal5g2900 NAM 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2900 - - mtr:MTR_8g093580 767.303