Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2873 ATGGCTTCTTCAATCAAAATCTCAAAGCTCATCTCTAGATCATTTTCTTCTTCGACCTCCTTGTTTTCTCGAGGTGGGAATGGTTATCTGGGTGGATTACTCTCTAAATACAGCACTGCTGCTGCCATTGATGAACAACCAATTAAACCATCGGTGCAAGTAGACCACACTCAGCTCTTAATTGATGGAAAATTTGTAGATGCTGCTTCTGGTAAAACATTTCCAACGTTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCCGTTGCAGCTGCACGCAAAGCATTCGATCAAGGGCCATGGCCTAAGTTTCCAGCCTATGAAAGGCAAAAGATAATGTTGCGTGCTGCTGATTTGATTGAAAAGCATAACGATGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAACCATATGAACAATCTGCTCAGATTGAAATCCCAATGCTGGTTCGCCTAATTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCAAGCTGATGGACCGCTTCATGTGCAGACATTGCACGAACCGATTGGCGTTGCTGGTCAGATCATTCCATGGAATTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCCGCATTGGCATGTGGCAACACTGTCGTTTTAAAAACGGCTGAACAGACACCATTGTCTGCTTTGTATGTAGCAAAACTATTTCACGAGGCTGGACTTCCTTCTGGTGTGTTGAATATAATATCTGGCTTTGGTCCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGCTTGCATTTACTGGTTCAACCGATACCGGAAAAGTTGTCCTTGAACTGGCAGCTAAAAGCAATCTTAAGCCGGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTTTGCGAAGATGCTGATATAGATGAAGCCGTTGAGCTAGCACACTTTGCCTTATTCTTCAACCAGGGACAATGTTGCTGTGCCGGGTCTCGAACTTTTGTTCATGAACGTGTGCATGAGGAGTTTGTTGAGAAAGCAAAGGCCCGTGCTTTGAAGCGTGCTGTTGGAGATCCATTCAAGTCAGGAACAGAACAAGGTCCTCAGATTGATTCAAAGCAATTTGAGAAAATATTGAAGTATATTAGATCTGGCGTTGAAAATGGTGCTACACTTGAAACTGGCCGAGGAGAAAGACTTGGTAGCAAGGGATTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGAAGAGATATTTGGTCCAGTACAAACCATATTGAAATACAAGGACCTTGATGAGGTAATTCAAAGAGCAAACAATTCAAAGTATGGTCTTGCAGCAGGGATCTTCACAAAGAACATAGACACTGCAAATACTTTGACTAGAGCGTTGAGAGTTGGTACAGTTTGGGTAAATTCCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGATATAAAATGAGTGGACATGGCAGAGAAAAAGGAGAATACAGTCTTAAGAGCTACTTGCAAGTGAAGGCTGTTGTTACACCTTTGAAGAATCCAGCATGGCTTTGA 1617 0.4304 MASSIKISKLISRSFSSSTSLFSRGGNGYLGGLLSKYSTAAAIDEQPIKPSVQVDHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKFPAYERQKIMLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLIRYYAGWADKIHGLTVQADGPLHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPSGVLNIISGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGRGERLGSKGFYIQPTVFSNVQDGMLIAKEEIFGPVQTILKYKDLDEVIQRANNSKYGLAAGIFTKNIDTANTLTRALRVGTVWVNSFDTFDAAIPFGGYKMSGHGREKGEYSLKSYLQVKAVVTPLKNPAWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2873 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 497 IPR016163 GO:0016620
Mal5g2873 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 31 538 - -
Mal5g2873 538 Pfam Aldehyde dehydrogenase family 65 528 IPR015590 GO:0016491
Mal5g2873 538 CDD ALDH_F2BC 54 530 - -
Mal5g2873 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 31 538 - -
Mal5g2873 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Mal5g2873 538 SUPERFAMILY ALDH-like 53 532 IPR016161 GO:0016491
Mal5g2873 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 526 IPR016162 GO:0016491
Mal5g2873 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 331 342 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2873 Mal-Chr5 85274572 85285420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2873 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 76.075 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2873 K00128 - gmx:100811891 938.332