Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2861 ATGCACAAAAAACTCAATCACATAATTCACACCCTCTTTATCTTCACTACTATCATTCTTTCCACACTTACTGTTGGTTTTGCAGTAAATCATGCAGAAGAGAAAAAGCAAAACTCATTCACTCCAAAGGCCTTGGTAATTCGCTATTGGGATAGAGTGATCAAAAACAACTTGCCAAAGCCATCCTTCATCCTCTCCAAAGCATCACCACTCAGAGCCATTGAAGCAGTTGCTTTCGAGAAATACGCGGCCGCCAATACACTCTCTACAAAGTTGCCGGAGTTCTGCTCGGCCGCCCATCTCCTGTGCTTACAGGATATAAATCCACAAAGTTGTCGTAAATCCATTTTCAAAGGATATGGTAAAAGAGTTGATTTAGATAAGAAGTTTAGCTTCAAAAGTTACGGTGTTACTGCCCCCTTTGAGGATTACGCAAAAAGAGGTATTATGTTCGGCACTTACACTAAATCTGTTAGTGGTAGTTTGGTAAAAAGCAGGTTGGTTCAACCGGGTAAATTTTTCAGTGAAAGGATGTTGAAGAAAGGGATGGTTATGTTCATGCCAGATATAAGGGATAAGTTACCCCAAAGGTCATTTTTGCCCCGATCCATTTTGACCAAATCGCCCTTTGATTCTTATAAGTTTAACGAGTTGAAGCAAGTTTTCAGTGTTTCTAACCATTGCCCTATAGAAAAGATCATGGTGGACTCGTTGAGAGAGTGTGAGAGGGCGCCGAGTAAGGGTGAAACCAAGCGTTGTTTAGGTTCGCTTGAAGATATGATTGACTTTGCAACTTTTATTTTAGGTCGCAATGTCACGGTTCAGTTCATTGAGAATGTAAATGGGTCAAATAATAATGTTATGATAAGTCAAGTTAGGGGGGTAAACGGTGGGAAAGTTACGCAGTCTGTGTCTTGTCATCAGAGTTTGTTTCCTTACTTGTTATATTACTGTCACTCGGTGCCAAAGGTTCGAATTTATGAAGCGGATCTTTTGGACCCTAAGTCTAAGGTCAAGATCAATCATGGTATTGCGATTTGTCACTTGGACACAACTGCTTCGAGTCCCACCCACGATGCATTCATGGCTCTTTGGTATGGTCCGGGTCGGATTGAAGTGTGTCATTGGATCTTTGAGAATGATATGACCTGGACTACCGCAAATTGA 1167 0.413 MHKKLNHIIHTLFIFTTIILSTLTVGFAVNHAEEKKQNSFTPKALVIRYWDRVIKNNLPKPSFILSKASPLRAIEAVAFEKYAAANTLSTKLPEFCSAAHLLCLQDINPQSCRKSIFKGYGKRVDLDKKFSFKSYGVTAPFEDYAKRGIMFGTYTKSVSGSLVKSRLVQPGKFFSERMLKKGMVMFMPDIRDKLPQRSFLPRSILTKSPFDSYKFNELKQVFSVSNHCPIEKIMVDSLRECERAPSKGETKRCLGSLEDMIDFATFILGRNVTVQFIENVNGSNNNVMISQVRGVNGGKVTQSVSCHQSLFPYLLYYCHSVPKVRIYEADLLDPKSKVKINHGIAICHLDTTASSPTHDAFMALWYGPGRIEVCHWIFENDMTWTTAN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2861 388 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 115 388 - -
Mal5g2861 388 ProSiteProfiles BURP domain profile. 173 387 IPR004873 -
Mal5g2861 388 SMART BURP_2 171 387 IPR004873 -
Mal5g2861 388 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 11 110 - -
Mal5g2861 388 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 115 388 - -
Mal5g2861 388 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 110 - -
Mal5g2861 388 Pfam BURP domain 173 385 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2861 Mal-Chr5 84919835 84921250 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2861 - - mtr:MTR_8g064500 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2861 5 84919835 84921250 Mal5g2861 5 84919835 84921250 ECH
Mal6g0136 6 1958442 1960428 Mal5g2861 5 84919835 84921250 PCT