Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2855 ATGTCACTCTCCACCACAACTTCTCACCTCACCATTCTTCCTTCACTTCCTTCAACTTCATCACTACTTTCTCTCAGATTTTCCTTCACTTTCCAACCAAAACGAAACCAAAAAACTTGTTTCACAACCCTCTTGTCTTCTTCATCAAGGCATGCTAGATTCTTGGTGAAGTCTCAATCTACTACTGCTTCTTCTGAGGCTGTGAAAGTGACACAAGCTCCTTCTGAAATGAAGGCTTGGGTGTATGGAGAATATGGAGGTGTTGATGTTTTGAAATTTGATTCCAATGTTGCTGTACCTGATGTTAAGAAAGATCAGGTTCTTGTTAGAGTTGTTGCTGCTGCTCTTAACCCTGTTGATGGTAAAAGAAGGCAGGGAAAGTTTAAGGCTACGGATTCTCCTCTTCCGACTGTTCCTGGCTATGATGTTGCTGGGGTTGTAGTGAAGGTTGGTAGTGAAGTAAAGGAGTTCAAAGTTGGTGATGAAGTGTATGGAGATGTAAATGAGAAAGCACTAGAAGGGCCTAAACAGTTTGGATCTCTAGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACTAAAACCTAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTAGCAATCGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTTCTGGTAAATCTATTCTTGTTCTTAATGGTTCTGGTGGTGTTGGAAGCCTAGTGATTCAGCTAGCTAAACAAGTTTTTGGAGCTTCAAGAGTTGCTGCAACTGCAAGTACTAGAAATTTGGAGTTGTTGAAAAGCCTTGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACAGGGCAGTGAAGGCTATAAAAGAAGGTGGAAGTGTAGTAGCACTAACAGGTGCTGTTACACCACCTGGATTCAGATTTGTAGTAACTTCCAATGGAGCTGTTCTGAAGAAACTAAACCCTTATTTAGAGAGTGGAAAGGTGAAGCCAATTATAGATCCCAAAGGTCCATTCCCCTTTGCTCAGGTTGCTGAAGCTTTCTCTTACATTGAAACAAACAAAGCTACTGGAAAAGTTGTTATATTCCCCATCCCATGA 1158 0.4154 MSLSTTTSHLTILPSLPSTSSLLSLRFSFTFQPKRNQKTCFTTLLSSSSRHARFLVKSQSTTASSEAVKVTQAPSEMKAWVYGEYGGVDVLKFDSNVAVPDVKKDQVLVRVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSEVKEFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLALKPKNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATASTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGAVLKKLNPYLESGKVKPIIDPKGPFPFAQVAEAFSYIETNKATGKVVIFPIP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2855 385 Gene3D - 218 332 - -
Mal5g2855 385 SUPERFAMILY GroES-like 74 231 IPR011032 -
Mal5g2855 385 Pfam Zinc-binding dehydrogenase 270 381 - -
Mal5g2855 385 SMART PKS_ER_names_mod 86 381 IPR020843 GO:0016491
Mal5g2855 385 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 39 385 - -
Mal5g2855 385 CDD MDR_like_2 77 381 - -
Mal5g2855 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 199 322 IPR036291 -
Mal5g2855 385 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 226 247 IPR002364 GO:0008270|GO:0016491
Mal5g2855 385 Pfam Alcohol dehydrogenase GroES-like domain 105 167 IPR013154 -
Mal5g2855 385 Gene3D - 84 381 - -
Mal5g2855 385 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 39 385 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2855 Mal-Chr5 84816773 84820061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2855 136 273 Monolignol Biosynthesis Gene Families AT4G39330 26.829 2.83e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2855 K18980 - gmx:100810816 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2855 5 84816773 84820061 Mal5g2855 5 84816773 84820061 ECH