Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2838 ATGCAACACTTCTCCGTGCACCACCTTCGTAACGCACACTGCTCCTCCACGGCAGGGTCCCTCATCGCCATCACTTTCAACCTCCGACACTTCTCGGCTGGGAACTTAGCGTGTGCTACGTCGGCGACAATTGACAAGGAGCCATGGTCGAAGTCGTCAATGGAAATGGTCCGCAACATCGGTATCTCAGCGCACATTGATTCCGGGAAGACGACGTTGATGGAGAGGATACTGTTCTACACTGATCGAATCTACAACAAGATCCATGAGGTGAAGGGGAAATATGGCGGTCCCATAGATAGCACTGATTTGGAGAGAATGAAGGGAACAATCCTTCAATCTGCTGCTACGTATTGCAATTGGAAAGACTATAAGATCAACATAATTGACACACTTGGTCACGTTGATTTCACCATTGAAGTAGAGAGAGCTTTGCGAGTTCTTGATGGTGTTGTTCTTTCCATTACCGTTGATCGCCAAATGCAAAGATATCAGGTTCCAAGAATTTCATTTATCAACAAGCTTGATCGAATGGGGGCTGATCCGTGGAAAGTTATAAATCAGGCTAGGTCTAAACTGAGGCACCACTGTGCTGCAATGCAAGTTCCAATAGGTTTGGAATGTGATTTTGAGGGAGTTGTTGATCTTGTGAAGTTAAAGGCTTATTATTTTAAAGGCGAAAATGGCGTAGATGTTGTTGTTGAAGAAGTGCCTGCAGCTATGGAAGCGTTGGTGGCAGAAAAAAGACGCGAACTCATAGGAACTGTGTCAGAGGTTGATGATATGCTTGCTGAAGCGTTTCGCGGTGATGATGAGAACATTTCAGATGCTGATCTTGAGGGAGCAATTCGTAGGGCTACCATTGCGCAGAAATTTATACCGGTATTCATGGGTAGTGCTTTCAAAAACAAGGGGGTGCAGCCACTTCTGGATGGCGTAGTTAGTTATTTGCCGTGTCCGATTGAAGTTAGCAATTATGCTCTTGACCAATCTAAGAATGAGGAGAAGGTTGAGCTGACTGGAAGTCCTGATGGGCCCCTTGTAGCATTGGCTTTCAAGTTGGAATAA 1068 0.4551 MQHFSVHHLRNAHCSSTAGSLIAITFNLRHFSAGNLACATSATIDKEPWSKSSMEMVRNIGISAHIDSGKTTLMERILFYTDRIYNKIHEVKGKYGGPIDSTDLERMKGTILQSAATYCNWKDYKINIIDTLGHVDFTIEVERALRVLDGVVLSITVDRQMQRYQVPRISFINKLDRMGADPWKVINQARSKLRHHCAAMQVPIGLECDFEGVVDLVKLKAYYFKGENGVDVVVEEVPAAMEALVAEKRRELIGTVSEVDDMLAEAFRGDDENISDADLEGAIRRATIAQKFIPVFMGSAFKNKGVQPLLDGVVSYLPCPIEVSNYALDQSKNEEKVELTGSPDGPLVALAFKLE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2838 355 Gene3D - 49 323 IPR027417 -
Mal5g2838 355 PRINTS GTP-binding elongation factor signature 127 137 IPR000795 GO:0003924|GO:0005525
Mal5g2838 355 PRINTS GTP-binding elongation factor signature 59 72 IPR000795 GO:0003924|GO:0005525
Mal5g2838 355 PRINTS GTP-binding elongation factor signature 143 154 IPR000795 GO:0003924|GO:0005525
Mal5g2838 355 Pfam Elongation factor Tu GTP binding domain 57 318 IPR000795 GO:0003924|GO:0005525
Mal5g2838 355 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 55 321 IPR000795 GO:0003924|GO:0005525
Mal5g2838 355 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 14 355 - -
Mal5g2838 355 CDD EF-G 59 320 - -
Mal5g2838 355 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 14 355 IPR045044 -
Mal5g2838 355 TIGRFAM small_GTP: small GTP-binding protein domain 58 213 IPR005225 GO:0005525
Mal5g2838 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2838 Mal-Chr5 84340989 84342716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2838 57 175 Eukaryotic Initiation Factors Gene Family AT3G22980 33.071 4.91e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2838 K02355 - gmx:100783315 499.59