Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2824 ATGGCTTTGGCGGGTGAAGAAGAAGAAGACAAGACATTGACGACGGTGGAAGGTGAAAAGCCCGCTCTCCTTTATTACTATTCTAGGAAACGCCTAAGAAGAAGAAGAGAGGATGAACCTGCTTCTTCTTCTGCTCCAAGAACAACAACTAAGGAGGGGAAAAATACTACTGGTTTAGGGTTTCAAAAGGAAGAAGATAATGAACCCACTGCTGCTGCTGCTCCTATCAGAAAAAGTGAACGTACAAGAAGAACAACACAAAAGGGGAAAAATGGTGGTTTAGGGTTTCAAAAGGAAGAAAAAAACAAGAAACCTGTTTTTGTTGTTGTTGTTGGCAGTAGTAGTAGTAGTAGAAAAAGAAAAGAGAGTAGTGATGATGCTGAAATCATGACTTTTTCTGATAATAAAGGTTATGCTTTAAGGGAAAAGAAACCCAAAACCATCATTCATCAGGAGAATGAGATTCTTCCCAAAAACAACAAGAAGAAGAAGAAGAAGACAGATCACAATAAGAGGATTGAACAAGAGTCCTTAATGTGCCATCAATGTCAAAGAAATGACAAGGGCAGAGTTGTCAGATGCACTAAATGCAAAAGGAAAAGATTTTGTGTACCCTGTATAAACAATTGGTATCCTCACTTGAAAGAAGATCAAATTGCTGAGGCATGTCCTGTGTGCTGTGGTAATTGCAACTGCAAAGCTTGTTTGAAGTCACGTCAACTTATCAATTCAATTAAAAACGACGATCAAACCAACAGCCACCATCACCTCCACCTCTCCAACTATATGCTCAAAGCTCTTCTTCCGTATTTAACACAATTGGATCAACAACAAATGGCCGAGAAGGAGATAGAAGCCAAGATGCACGGGCTACCACTCTCTGAGCTAAAAATTGAAGTTGGACATTTTAATGATGATGAGCGCATGTACTGCGACAACTGCAAAACGGGAATATTTGACTACCACAGAAGCTGTACAAAATGCCCTTTTGACCTCTGTCTCTCCTGTTGCCACGAGCTTCGTTGTGGGCAGCTTCTAGGTGGTGCAGATCCATCTGATTTCGAGTTTGTCTTCCGAGGGCCAGCTTATCTGCATGCTGGAAAGGAAGAGGGGGAAAAAAGATACAAAGCACCTCATGCTGGTTCCCAGCCTGAGAGTCGTACATGGTCAAAATCTGGGTGGCATGCAGGTAGTGATGGCAATATTCCCTGTCCGATACCCAAGAATAAATGTGATCATGGTTACCTTGAACTGAAAAGCATATTTCCGGAAAATCGCATCTCTGAGTTAGTATGTAAAGCAAAAAACCTTGCAGATTCAATTAAACTTCAAGATGCAGAGGATACTCTTGATAATAGCTGTTCTTGTTTGAAGCACAATAACACAAGGAAAGCAGCTCTTCGTCAAGATTCCACGGACAACTATTTGTACTGTCCTAGGGCTAAAGATCTTCATCATGAGGATTTAGGACATTTTCAATGGCACTGGAGCAAAGGAGAGCCTGTAATTGTAAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGCCAGATAAGCAAGAACAAGCAAAAATCACTTCTGGATGTGAAGGCACTTGATTGCTTAGATTGGTGCGAGATCGATATTAATGTGCACCAATTCTTTACTGGGTACACAAAGTGTCCCAAGGATAAAGAGAATTGGCCTCAAATATTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTACCGCGTCATTGTGCTGAGTTCATATCTTCCTTGCCATATAAAGAATATACAAATCCTTTCAAAGGTGCCCTTAACCTTGCTGCGAAGCTGCCTGACAAGGTTCTAAAGCCAGACATGGGACCAAAAACATATATTGCTTATGGATTCGCTCAGGAGCTTGGAAGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTAAAGCAGAACTGGAACCTGAGAGTATTAATGCAATTAAGGTCGTGAAACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATTATCAGGATGGAGAGACCAATCTTGACATGCTTGGCAATTCGTCTTCTTCCATGAATGCTTCAGAGAGCACTGATGATGATGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTGCGTTGGAGGAATATCTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTTTAGAGAAGGTTGTTCACCCCATCCATGACCAGAGCCTTTATCTAACCATTGGGCATAAGAAGAAGCTTAAGGAGGAGTATGGAATTGAGCCTTGGACTTTTGTTCAGAAGCTAGGAGATGCTGTTTTTATTCCAGCTGGTTGCCCCCACCAAGTCAGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGCGAGTGCTTCCGGTTGACAGAGGAGTTCCGCAAACTTCCAGTAAATCACAGGTCCATAGAGGACAAATTGGAGGTGAAGAAAATGATTATCCATGCTATGATTGATGTGGTTAAGAAGTTAGAAGAAAGTAAGGTTACTTCAAAAAAAAAAGAAGAAAGTAAGGTCTGA 2658 0.4157 MALAGEEEEDKTLTTVEGEKPALLYYYSRKRLRRRREDEPASSSAPRTTTKEGKNTTGLGFQKEEDNEPTAAAAPIRKSERTRRTTQKGKNGGLGFQKEEKNKKPVFVVVVGSSSSSRKRKESSDDAEIMTFSDNKGYALREKKPKTIIHQENEILPKNNKKKKKKTDHNKRIEQESLMCHQCQRNDKGRVVRCTKCKRKRFCVPCINNWYPHLKEDQIAEACPVCCGNCNCKACLKSRQLINSIKNDDQTNSHHHLHLSNYMLKALLPYLTQLDQQQMAEKEIEAKMHGLPLSELKIEVGHFNDDERMYCDNCKTGIFDYHRSCTKCPFDLCLSCCHELRCGQLLGGADPSDFEFVFRGPAYLHAGKEEGEKRYKAPHAGSQPESRTWSKSGWHAGSDGNIPCPIPKNKCDHGYLELKSIFPENRISELVCKAKNLADSIKLQDAEDTLDNSCSCLKHNNTRKAALRQDSTDNYLYCPRAKDLHHEDLGHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQISKNKQKSLLDVKALDCLDWCEIDINVHQFFTGYTKCPKDKENWPQILKLKDWPPSNLFEESLPRHCAEFISSLPYKEYTNPFKGALNLAAKLPDKVLKPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAKAELEPESINAIKVVKQKHLEQDKRELHGDYQDGETNLDMLGNSSSSMNASESTDDDDGALWDIFRREDVPALEEYLKKHFREFRHVHCSPLEKVVHPIHDQSLYLTIGHKKKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHRSIEDKLEVKKMIIHAMIDVVKKLEESKVTSKKKEESKV* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2824 885 Pfam JmjC domain, hydroxylase 726 823 IPR003347 -
Mal5g2824 885 SMART cupin_9 590 840 IPR003347 -
Mal5g2824 885 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g2824 885 MobiDBLite consensus disorder prediction 43 63 - -
Mal5g2824 885 ProSiteProfiles JmjC domain profile. 609 840 IPR003347 -
Mal5g2824 885 ProSiteProfiles Zinc finger RING-type profile. 180 226 IPR001841 -
Mal5g2824 885 MobiDBLite consensus disorder prediction 373 393 - -
Mal5g2824 885 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 36 872 IPR045109 GO:0032454|GO:0033169
Mal5g2824 885 MobiDBLite consensus disorder prediction 1 16 - -
Mal5g2824 885 MobiDBLite consensus disorder prediction 28 99 - -
Mal5g2824 885 SUPERFAMILY Clavaminate synthase-like 488 863 - -
Mal5g2824 885 Gene3D Cupin 473 849 - -
Mal5g2824 885 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 175 244 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2824 Mal-Chr5 83949854 83957792 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal5g2824 JmjC 2.6e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2824 K15601 - gmx:112997634 964.911