Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2819 ATGAGTGAAAGTGAAAAGTTTGAGTTAGATAGAAAGGAGGGTTCTTTAGATTGGAGGTTTGTGAGTGGCAACCTTGCAAATTCATCTGTAGGTTTGGTTTCAATGGAAGATTCTATGAATTTAAGTAGAGGGGATGTGATTGGTTCTTCGTGTTCCGATTCAATGGTGGATTCATATGGTCCTAACTTCTTGGACCTTCTTACTAATTCTGAAAACTTGGGTGGTTATGATAGTAGAGCACTAGGAATGAGTTGGAACTTTGATAGTTCTATGATGAAGAGGGATGGTGTTTTAAGAAATGGGCCTGAGTTATTTCCTCAAAGTTTGTCTCATTTTCCAACTGATTCTAGGTTTATTGATGCTGCAAGAATGTCATGCTTTAGTACCGGGGGTTTCGTAGATATGGTTAACTCGTGTGGGATTCCTCAGTCTATGGCTCTACATGTGTCTCGGTCTGTTGAGCATCTTGGTAGTGATGGAAATCCACTCCAGAATGATAGAAAAAGTGATTGTCCTGTAATGTCTCCTGGTGAAGGGAAAGAAGCTCTTGGAGGGTCTTGTAATGAAGCTGATGGAGATGAATCAAGTGCTGATGATGGTTCCCAAATGTTGGATTGTGCAAGTGGAGAACCTTCTATTAAAGGTCTAAATCCAAAGAAAAGGAAAAGAAATGGGCAGGATGGTGATAGTGATAAAACAACTAGAACTCTTGAGCTACCAAGGGAAACCGCAAAGGACAACTGTGAGAGTAGAAAAAAGGGAAAGCAGCAAACAACTTCAACAACCAAGGCTTCTGGTAAGAATGCCAAACAGGGGTCTCAAGCCTCTGATCCGCCTAACGAGGGATACGTACATGTTAGGGCTCGCCGTGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTGAGGAGAGAAAAGATCAGTGAAAGAATGAAGTTTCTTCAAGATCTTGTACCTGGATGCAACAAGGTCACTGGCAAGGCGGTGATGCTAGATGAAATCATTAATTATGTACAGTCTCTTCAACAACAAGTTGAGTTTTTATCAATGAAACTTGCAACAGTAAATCCACATGTGGATTTTAATATGGAACGACTGCTTGCTAAAGATATTCTTCAACATCAACCGGGTCCGTCATCTGCACTGGGGTTTCTCCGAGAAATGCCAATGACTTTTCCTCCATTATCACATTCATATCAACCAGGACTGATTCGTTCGACTCTACCTAACATGGCAAATTTATCAGATATGCTTCGACAGACTGTTCAACCACAGGTGGAACCTTTGGCTGGGGGATTTGAAGAGCCAAATCAGGTTAATCCATTGCAAGCAGCCAAGGACTGA 1347 0.418 MSESEKFELDRKEGSLDWRFVSGNLANSSVGLVSMEDSMNLSRGDVIGSSCSDSMVDSYGPNFLDLLTNSENLGGYDSRALGMSWNFDSSMMKRDGVLRNGPELFPQSLSHFPTDSRFIDAARMSCFSTGGFVDMVNSCGIPQSMALHVSRSVEHLGSDGNPLQNDRKSDCPVMSPGEGKEALGGSCNEADGDESSADDGSQMLDCASGEPSIKGLNPKKRKRNGQDGDSDKTTRTLELPRETAKDNCESRKKGKQQTTSTTKASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMERLLAKDILQHQPGPSSALGFLREMPMTFPPLSHSYQPGLIRSTLPNMANLSDMLRQTVQPQVEPLAGGFEEPNQVNPLQAAKD* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2819 448 MobiDBLite consensus disorder prediction 254 278 - -
Mal5g2819 448 PANTHER BHLH TRANSCRIPTION FACTOR 75 151 - -
Mal5g2819 448 PANTHER BHLH TRANSCRIPTION FACTOR 156 442 - -
Mal5g2819 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 292 342 IPR011598 GO:0046983
Mal5g2819 448 MobiDBLite consensus disorder prediction 155 282 - -
Mal5g2819 448 Gene3D - 289 361 IPR036638 GO:0046983
Mal5g2819 448 MobiDBLite consensus disorder prediction 215 253 - -
Mal5g2819 448 SMART finulus 298 348 IPR011598 GO:0046983
Mal5g2819 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 361 IPR036638 GO:0046983
Mal5g2819 448 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 75 151 IPR024097 GO:0006355
Mal5g2819 448 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 156 442 IPR024097 GO:0006355
Mal5g2819 448 CDD bHLH_AtBPE_like 282 367 - -
Mal5g2819 448 Pfam Helix-loop-helix DNA-binding domain 295 343 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2819 Mal-Chr5 83835924 83838606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2819 49 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 43.885 6.36e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g2819 HLH 4.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2819 - - mtr:MTR_8g065740 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2819 5 83835924 83838606 Mal5g2819 5 83835924 83838606 ECH