Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2788 ATGGAGCTATTCCCAGCACAACCAGATTTATCATTGCAAATCAGTCTTCCAACAAACAACAAACAAACAACATCATCATCAAGTCAAGAAGATGTGGATTTAGGATTTTGGAAAAGAGCTTTAGAATCCAAAACAACTGCAAATTACACTTTTGACCTTTCCCTCTCCAATCCAAGGGCTTCCTCTTCAAATCTCAACAATCTCATAACTAACCCTTATCAACCATTTCATCAAAACCAAAACAATTACCAAAGCCTAAGTGAAGAGCTAGGTTTTCTTAAACCTATAAGAGGAATTCCAGTGTATCATCAAAACCCTACTTCTCCTATTGCATTATTTTCTCAACCACAACCACACTTTGATGTTTCTACTTCAAGTTCAACAACAACTTTTCATCCTCAAACTTTGATGAGATCGAAGTTGTTGCCGCGGTTTCCTTCAAAGCGTAGCGTGAGAGCTCCAAGGATGCGTTGGACTACAACTCTTCATAATCGCTTTGTTCATGCTGTTGAACTTTTGGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACCTTATCACATGTTAAATCTCATTTGCAGGTATAA 615 0.3821 MELFPAQPDLSLQISLPTNNKQTTSSSSQEDVDLGFWKRALESKTTANYTFDLSLSNPRASSSNLNNLITNPYQPFHQNQNNYQSLSEELGFLKPIRGIPVYHQNPTSPIALFSQPQPHFDVSTSSSTTTFHPQTLMRSKLLPRFPSKRSVRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2788 204 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 154 204 IPR006447 GO:0003677
Mal5g2788 204 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 203 - -
Mal5g2788 204 SUPERFAMILY Homeodomain-like 151 203 IPR009057 -
Mal5g2788 204 Gene3D - 153 204 - -
Mal5g2788 204 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 203 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2788 Mal-Chr5 82807707 82808532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2788 1 204 G2-like Transcription Factor Family AT4G17695 43.421 1.51e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal5g2788 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2788 - - aprc:113868756 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0667 6 9425307 9430340 Mal5g2788 5 82807707 82808532 PCT