Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2755 ATGAAGATTGAAAATTGTTGTGAAACAATGGCTTTGGAAACTCTTTCATCATCATGTAATGAGTTTTCAAACTTCATTATCTATGACACAATTTCTGCAACTCCATTTAGTAGTAACCATATTGATACAACAACAGAAACTAGTTTCTTGGAAAATACAATGAACTATGATGAGCAACATCATCATGAAGCTGCAATATTTGATTCTATGATGAATAGCAGAAAAAGACAATCTATGGAGCAAGAAGAAACAATGAATAATCAAGTAGTGCAAGGGAGGAAGAAGAGGAGAAGAAAACCAAGAGTTTGTAAGAACAAAGAAGAAGCTGAAACACAAAGAATCACACATATAACTGTTGAGAGAAACCGTAGAAAGCAAATGAATGAACATCTTGCTGTACTTCGTTCACTCATGCCTGAATCCTATGTTCAAAGGGGTGACCAAGCCTCAATAGTAGGTGGTGCCATAGAGTTTGTGAAGGAGCTAGAGCATCTCTTGCAATCACTTGAAGCAAGAAAGTTGCAACTTTTACAGCAAGAAGTAGCACAAGAAAGCAATGAAGAAGAAATGGCAATTTCAAAACCACCTTTTGCACAATTTTTTGTGTATCCTCAATATACATGGTCCCAATCACCTAACAAATACACATCCAAGACCAAAGCTGCCATAGCTGATATCGAGGTTACATTGATCGAGACTCATGCAAACCTTAGAATTCTCACTAGGACAAGACCAGGACAACTAACTAAATTAGTTGCTGGTTTTCAAACACTCTTTCTTACCATCCTACATCTCAATGTCACTACCATACAACCTTTGGTATTCTACTCTATCAGTGCCAAGGTTGAAGAAGGATTCCAGCTTGGATCAGTAGATGGCATTGCAACAGCAGTTCACCATTTACTTGGAAGAATTGAGGAAGAAGCTTCACTAACTTGTTGTTAA 945 0.3725 MKIENCCETMALETLSSSCNEFSNFIIYDTISATPFSSNHIDTTTETSFLENTMNYDEQHHHEAAIFDSMMNSRKRQSMEQEETMNNQVVQGRKKRRRKPRVCKNKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEARKLQLLQQEVAQESNEEEMAISKPPFAQFFVYPQYTWSQSPNKYTSKTKAAIADIEVTLIETHANLRILTRTRPGQLTKLVAGFQTLFLTILHLNVTTIQPLVFYSISAKVEEGFQLGSVDGIATAVHHLLGRIEEEASLTCC* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2755 314 CDD bHLH_AtFAMA_like 114 173 - -
Mal5g2755 314 PANTHER MAX DIMERIZATION, MAD 10 312 - -
Mal5g2755 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 162 IPR011598 GO:0046983
Mal5g2755 314 Gene3D - 103 181 IPR036638 GO:0046983
Mal5g2755 314 PANTHER TRANSCRIPTION FACTOR BHLH71 10 312 - -
Mal5g2755 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 179 IPR036638 GO:0046983
Mal5g2755 314 Pfam Helix-loop-helix DNA-binding domain 112 163 IPR011598 GO:0046983
Mal5g2755 314 Coils Coil 159 194 - -
Mal5g2755 314 MobiDBLite consensus disorder prediction 81 109 - -
Mal5g2755 314 SMART finulus 117 168 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2755 Mal-Chr5 81916125 81918323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2755 103 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 57.143 4.20e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g2755 HLH 5.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2755 - - pvu:PHAVU_003G284500g 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2755 5 81916125 81918323 Mal5g2755 5 81916125 81918323 ECH