Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2752 ATGGCGTTTGAGAATCAAGACACTGTCCGTGAAATTAAGCCCAAAAACAGGAGAATCATGGGTGCTGGAGGACCTGATGATGAGGAAAATAGGTGGCCACCATGGTTGAAACCTCTGCTCAAAGAGCGTTTCTTTGTTCAATGCAAGTTGCATGCTGATTCACACAAGAGTGAGTGCAATATGTATTGTTTGGATTGTATGAATGGTGCTCTTTGCTCTCTCTGCCTCAATTACCACAAAGATCATCGTGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAAGTGTTGGACATATCAGGTGTTCAAACCTATATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGAAAAGGTGTCACCAACACTTGTGAAGTCTGCGAGCGCAGCCTTCTCGATTCCTTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGAACTTCAATGAATTTCCAGAAGAAGAACAAGTCAGCTCTTGCTTCAATGATATCAGACTCAGAGGATTCACACAGCAGCAGTTGTAGCCACGGAAGACTGAAGAACATTAAGGTGCAGAGTTTCACTCCTTCAACACCACCACCAACAGTTAATTACAGAACAGCTAAAAGAAGAAAGGGAATTCCTCATCGTGCCCCGTTGGGAGGACTAGTGTTGCAATACTAG 708 0.4379 MAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSMNFQKKNKSALASMISDSEDSHSSSCSHGRLKNIKVQSFTPSTPPPTVNYRTAKRRKGIPHRAPLGGLVLQY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2752 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 230 - -
Mal5g2752 235 Pfam PLATZ transcription factor 88 159 IPR006734 -
Mal5g2752 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2752 Mal-Chr5 81855944 81858462 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal5g2752 PLATZ 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2752 - - mtr:MTR_8g066820 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2752 5 81855944 81858462 Mal5g2752 5 81855944 81858462 ECH
Mal6g0704 6 10138178 10140073 Mal5g2752 5 81855944 81858462 PCT