Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2741 ATGGCTTCCGATAGCTTCACCGACAAGAACGCCGTGTTCAGAAAACTCAAGACCAAATCTGAAAACAAGTCGTGTTTCGATTGCAATGCGAAGAATCCAACATGGGCGTCAGTAACGTATGGGATCTTCCTCTGCATTGATTGCTCTGCTGTTCATCGAAGTCTCGGCGTTCATATCAGTTTCGTGAGATCTACAAACTTAGACTCATGGACTCCTGAGCAGCTTAAAATGATGAGCTTTGGAGGAAACAGTAGGGCACAGGTTTTCTTTAGGCAGCATGGTTGGAATGGTGGTGGTAAAGTAGAGGCAAAGTATACATCCAGAGCTGCAGAGTTGTATAAGCAACTGCTTTCAAAGGAAGTTGCTAAAAGTATGTCTGAGGAGGCTGCATTGTCTTCATCACCTGCTGCTGCTTCTCAGTCTGCCCAAGGGGCTAATGGACTTCCTGATGTTAGGACTAATCAAGTCCCAATTGAAAAGACTGTGGAGCAGCCAGAAAAGACTGTGGAGAAACCTGAAAAGACCGAGAGCACTTCTTCACCTAGAGCATATACTGCAGTTTCAAATAATTTGAAGAAGCCTATTGGAGCCAAAAAACCCAGTAAGACTGGGGGGCTTGGAGCCCGTAAGCTCACTAAAAAGCCAAGTGAGTCCCTCTATGAGCAGAAGCCTGAAGAACTACCTGCTCCAGTTTCATCATCGGCAATTACAAAAAACAACTTGCCTTCTGGGCCACCTCTAACATCTCGGTTTGAGTATACAGATGATGTCCAATCATCTGAGTTGAATTCTGGAGGTTCAAATGTAACTGGTCACGTGTCTGCACCAAAATCATCATCAAGCTTCTTTTCTGACTTCGGAATGGATAGTGGCTTTCCAAAGAAATCTGGGACAAGCTCCTCCAAAGTGCAAGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCAAAGTCTATTTCTTCATCCCAATTTTTTGGAGACCAGAGCAAGGCTAATGTGGAGGCTCAAGCTACTTTATCAAAGTTTTCAGGTTCATCTGCCATCTCCAGTGCCGATCTTTTTGGTGACTCGAGAGACAACTCTGTTGATCTTGCTGCTAGTGACCTTATCAATAGAATATCTTTCCAGGCACAACAGGATATCTCTTCCCTTAAGAACATTGCAGGAGAGACTGGGAAAAAACTCACCTCCTTGGCATCCTCCTTGATGACAGATCTTCAGGACCGAATCCTCTAA 1236 0.4434 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNSRAQVFFRQHGWNGGGKVEAKYTSRAAELYKQLLSKEVAKSMSEEAALSSSPAAASQSAQGANGLPDVRTNQVPIEKTVEQPEKTVEKPEKTESTSSPRAYTAVSNNLKKPIGAKKPSKTGGLGARKLTKKPSESLYEQKPEELPAPVSSSAITKNNLPSGPPLTSRFEYTDDVQSSELNSGGSNVTGHVSAPKSSSSFFSDFGMDSGFPKKSGTSSSKVQESDEARKKFSNAKSISSSQFFGDQSKANVEAQATLSKFSGSSAISSADLFGDSRDNSVDLAASDLINRISFQAQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2741 411 MobiDBLite consensus disorder prediction 232 277 - -
Mal5g2741 411 MobiDBLite consensus disorder prediction 292 322 - -
Mal5g2741 411 Pfam Putative GTPase activating protein for Arf 12 106 IPR001164 GO:0005096
Mal5g2741 411 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Mal5g2741 411 Gene3D Arf GTPase activating protein 1 140 IPR038508 -
Mal5g2741 411 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 411 - -
Mal5g2741 411 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 411 - -
Mal5g2741 411 MobiDBLite consensus disorder prediction 163 177 - -
Mal5g2741 411 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Mal5g2741 411 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Mal5g2741 411 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Mal5g2741 411 MobiDBLite consensus disorder prediction 132 277 - -
Mal5g2741 411 CDD ArfGap_ArfGap2_3_like 8 123 - -
Mal5g2741 411 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Mal5g2741 411 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mal5g2741 411 MobiDBLite consensus disorder prediction 132 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2741 Mal-Chr5 81547475 81553165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2741 13 90 C2H2 Transcription Factor Family AT4G21160 46.835 4.21e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2741 K12493 K11855 gmx:100785169 596.275