Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2739 ATGACTAACATGTGGACTGACGAAAACTCCTCCGTCATGGAAGCTTTCATGACCACCTCCGACCTATCTAATTTCTGGCTTCCAACACCACATTCCGCCGCATCGACCACCGCACCGATAGCCGAACAACCACGACCACCACAGCCACCACAACATCTCTTTAATCAAGAGACTCTCCAACACCGTCTTCAAGCATTAATTGAAGGTGCAAAAGAAAACTGGACTTATGCTATCTTCTGGCAATCCTCTTACGACTACTCAGCCATACCACTCCTTGGTTGGGGTGATGGATATTACAAAGGCGATGCATATTACAAAGGCGAAGAGGAGAAAGAGAAAGCTAAGAAAGTTATTTCACCTGAACAACAAGCTCATCGTAAGAAAGTTCTACGTGAACTTCACACGTTAATTTCCGGTTCGTCTGTTTGTGATGATGCCGCTGAGGAAGATGTCACCGACACTGAGTGGTTTTTTCTCACGTCGATGACACAATCCTTCGTCAACGGCAGTGGATCTCTTAGTCAAGCTTTTTTTAATTCTACCCCGGTGTGGATCACCGGGGCAGACAAACTTTCCATTTCTGCTTGTGAACGAGCCCGTGAAGCACAGATTCACGGGCTACAGACTTTTGTATGTATACCAACACCGTTCTCAAACGGTGTTGTTGAGCTTGTTTCTACAGAGATAATTCCACATAGCGCTGATGTAATGGAGAAGATTCGTGTTTTGTTTAATTTCAACAACCCTGAAAATGGATCGTGGCCGTTGAATTCTGTTACCACGAGCGAGCACGATCCTTCCTCTGTTTGGCTCAACAATCTCTCCGCCTCTGGAGCGGTTGAAATTCGAGATTCTGTTCCTGCTGCCGCCGTTCCTGTTGTTGACGCCACTGCTTCTGCAAATGTAGTAATCAGTAAAACATTGCCGTTTGAAAACCATGGTTCTACCAGTACTCTAACGGAAACACCAACCGCCGTTAACTTTGCCAACGCTCAGCGCCAGAACCAGAGCTACTTTCTGAAGGAATTGAATTTTTCGAGTCCAATGAAACCAGAATCCGGCGAGATTTTGAGTTTTGGTGAGAGTAAAAAGAGTTCATATAACGCTGGAAATGGAAATTTCTTCTCCGGTGAAGAAAACAGAAAAAGAAAGTCTCCTGTGTCTAGAAGCAGCATTGACGATGGAATGCTTTCATTCACTTCCGGTGTAGTCTTACCGGCTTCAAACATGAAATTTAGTGGCGGAGGAGGAGGAGGTGGTGGAGATTCCGATCATTCAGATCTAGAAGCTTCTGTGGTGAAGGAAGGTGAAAGTAGCAGAGTGGTGGAGCCAGAGAAGCGGCCGAGGAAACGAGGAAGAAAACCGGCGAACGGAAGAGAAGAACCGTTGAATCACGTAGAAGCAGAGAGACAAAGAAGAGAAAAGCTTAACCAGAGATTCTACGCTCTACGTGCTGTGGTACCAAATGTTTCTAAAATGGACAAAGCATCGCTCCTAGGCGACGCGATTTCTTATATTAACGAATTGAAATCGAAGTTACAAGGGCTGGAATCATCGAAAGGTGAATTGGAGAAACAATTAGGTACATCAAAAAAGGAATTAGAACTTATTGCAAGCAAAAATCAAAATCAGAATCAAAATCCAATTCCATTAGATAAAGAAAAAGAGAAAACAACTAGCTCTTCTCCTAAGTTGATTGATTTGGATATTGATGTGAAGATTATGGGTTGGGATGCAATGATAAGAATTCAATGTAGCAAGAAGAATCATCCTGCGGCGAAGTTGATGGCGGCGTTGAAAGAATTGGATCTTGAAGTGAATCATGCTAGTGTGTCTGTGATGAATGATTTGATGATTCAACAAGCTTCTGTTAACATGGGAAGTCAATTTTACACTCAAGAACAACTTTTGTCTCTTCTTTCTTCCAAAATTGGTGATGCACAAGATTGA 1950 0.4333 MTNMWTDENSSVMEAFMTTSDLSNFWLPTPHSAASTTAPIAEQPRPPQPPQHLFNQETLQHRLQALIEGAKENWTYAIFWQSSYDYSAIPLLGWGDGYYKGDAYYKGEEEKEKAKKVISPEQQAHRKKVLRELHTLISGSSVCDDAAEEDVTDTEWFFLTSMTQSFVNGSGSLSQAFFNSTPVWITGADKLSISACERAREAQIHGLQTFVCIPTPFSNGVVELVSTEIIPHSADVMEKIRVLFNFNNPENGSWPLNSVTTSEHDPSSVWLNNLSASGAVEIRDSVPAAAVPVVDATASANVVISKTLPFENHGSTSTLTETPTAVNFANAQRQNQSYFLKELNFSSPMKPESGEILSFGESKKSSYNAGNGNFFSGEENRKRKSPVSRSSIDDGMLSFTSGVVLPASNMKFSGGGGGGGGDSDHSDLEASVVKEGESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQGLESSKGELEKQLGTSKKELELIASKNQNQNQNPIPLDKEKEKTTSSSPKLIDLDIDVKIMGWDAMIRIQCSKKNHPAAKLMAALKELDLEVNHASVSVMNDLMIQQASVNMGSQFYTQEQLLSLLSSKIGDAQD* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2739 649 MobiDBLite consensus disorder prediction 410 470 - -
Mal5g2739 649 PANTHER MYC 5 645 IPR045084 GO:0003700|GO:0006355
Mal5g2739 649 PANTHER TRANSCRIPTION FACTOR MYC2 5 645 - -
Mal5g2739 649 MobiDBLite consensus disorder prediction 33 53 - -
Mal5g2739 649 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 463 528 IPR036638 GO:0046983
Mal5g2739 649 MobiDBLite consensus disorder prediction 370 393 - -
Mal5g2739 649 SMART finulus 466 515 IPR011598 GO:0046983
Mal5g2739 649 Gene3D - 452 541 IPR036638 GO:0046983
Mal5g2739 649 Coils Coil 506 533 - -
Mal5g2739 649 MobiDBLite consensus disorder prediction 539 560 - -
Mal5g2739 649 MobiDBLite consensus disorder prediction 427 470 - -
Mal5g2739 649 CDD bHLH_AtAIB_like 457 533 - -
Mal5g2739 649 Pfam Helix-loop-helix DNA-binding domain 464 509 IPR011598 GO:0046983
Mal5g2739 649 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 460 509 IPR011598 GO:0046983
Mal5g2739 649 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 244 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2739 Mal-Chr5 81499209 81501158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2739 3 645 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 50.000 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g2739 bHLH-MYC_N 6.7e-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2739 K13422 - gmx:100790854 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2739 5 81499209 81501158 Mal5g2739 5 81499209 81501158 ECH