Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2712 ATGTTTCCTCTTTTTCTGAAAAATATCTCCTCTGCCCCTTCTTTTTTTTCATCATCGCAAGTTCGCAAGCGTTTTACTAGGTTTCAAGTGTGTGAGTTCTCATCATCATCATCTCCTTTTCCTCCGCAACCTCCTGAGGTTTCGGTATGGTGGCACCTTGACAGCTGTCCCGTGCCGTCTGGGGTTAGCTTTTGGAAGGTAGCACCTTCAATTACGGCAGCCGTTAGAGCTAACGGGATTATGGGTAAAATTCGTATTCGCGCTTATGGCGATTTTAATTCTCCAGAGGTCGACAAAGAGGCTCTTAATGCAACCAACATTTCTCTATACTCCATTACCAATGTGTCTTTTATCAAACCAAAAATAAATACCGATGGAAAGAACAATACATATAAGCATTTTCTTATGGATCTTAATCATTGGGTTTCCTCAAAACCTCCACCCCTACACCTCTTTGTGATATTTGGTAATGGAGACTTCTCTAGCAGTGGCATATTGCACCGGTTAAGAATGTGCAACTACAATATCTTGCTTGCATGTCCAGGAAGGGCTCATGTTGCTCTCTGCCATGCAGCAACTATAATGTGGGAGTGGTCTTCGATGCTCAAGGGGGAAGACCTTACAGGAAAACATTTCAACTATCCTCCTGATGGTCCGTTTAATTCCTGGTATGGAAACTCAAATGTGCCTCTTGAAAACCCCTTCTCAGTTGCTGAGTTGCACACAACTTCACAAAATGTGGAGATTTACAAACCTTCCTTGGAGATTAAGTTAGGTGAAAATATTGTGAAAATATTGTGTTCGCACCCAATAGGGATCTCCATGGGAGATCTTCGTGCAGAGTTGACAAAGTGTGATCTGCCTTTGGGTAAACACTTCTATGGTCATAATTTTTTTTCCAACTTTCTAGTATCTATGCCACAATTACAACTCGAGTATTTAGGAGGAGGTAATTTTTGGGTGCGTTTGTTCCCATCCACAACATCTGTTGTTAAGAATAAGCAGATGGATGGTGCCGCAACTCAAAAGCTACAAAATGAGGGTAAAATTATGGATACAAGTGCAGACATGATTTCTAGAATATCGTGTGTTAGCAGCGAGGGTGATGATTTAAAATCATTCCAATCTAACAATGACATTGTTAAGTCCGATGATGTAAGTTTTGAAATTCTGGAAAAAATAAACCCTTCACAGAATCCCTATACTTGTACTGATTGCACCATGTTGAAAAACAATAATATAGCAAATCTTGAACCCGAAAAAGTAGACAACAAACATGAGATTCCAACTAGAAAGGAGGTTGATGGATTTTGTCGTAGCCCATTTACGTCAACTTTCTTTAGTAGGATTAGGAGTTGGTGGAGAAAGCTTAAGTTGTTTAAGGATTCAAAGTTATCTGAAGTAGACCAGAGTTCTAGTCATCCTCTCCAGCCTCATTGGGATACCTTTAGGGTTTCAGTATGGTGGGACTTTGACAGCTGCGGTGTCCCTTCTGACTTTAGCTTTTTGAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGAATTAAGGGCCCTATTTATATTGACGCTTATGGCGATGTTTCTCAACTTTCAGAGATCAAACAAGAAGCACTTTTCTTATCTGGCGTTGATCTCCATCACATTCCAGATGGAATGAACAAGAACAAATGCTTTATGGATTGGCTTTCTAGAAATCCCCCACGCGGACACTACTTTTTGATATCTGGTGATAAAGACTTCGACTTCTCCAGCACATTGCATCGGACCTCATGCTTTATGAATGGCAACTTCTTGCTTGCATGTCCTGGAAAGGCTCATGGTTATGTCTGCAAAGTAGCAACTATAGTGTGGCAGTGGTCTTCAGTGCTCAAGGGGAATTATCTTACTGGAAAATATATCAAGCCTCTTCCTGAGTGGTATATTAAGGCGTGGGTGCAGGTGCCTCTTGAATATCCTCCCGGGTGGTATAGAAACTCGAAGGCGCCTCGTGAAAACCCCTTCTCAGCTGCTGAGGAGCCCACATATTCACAAAATGCAAAGATCCACGAACCTTCCTCGTACATAAAGTTATTTGAAGTTCAAGAGTCGGTTTCTAGGCAGGTTAGGAAGGTATTGAGTTCATACCCGAATGGGATCTCCATTGGAGATCTTAATTTACAGTTGAGAGTGATTTTTGATGGAGGCTTATGTGGATGTAAAAAGTTTCCTGAAATTCTAGCATCTATACCACATGTACAACTCTTGTATATAGGAGATGATAATTTTTGTGTACGTTTGATCCGATCAACAACATCTAATGTTAAGAAGAAGCAGTGGGCTGTTAAGAATGAACAGAGGGATGTCAATCATTCAGGAATGCATGCGTTATTTTCTACTGGTTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACGTCTAGAGGATCACGTCTTCTTTCCCGGTCAAGAAGCAGGGAGGATCTGGCTCATAGATTACAAAAGCATGGATCCCTGTTTTTTATGTCTCTCACTGAAAATAAAATCCTTCAATTGGTAGAATTGTTGATAGTGGAGAAGAAATGGTTGGTGGAAAGCCCCTCGCAAGCATTTCCTTTTAGGCTAACTAAATCAGTTCAGAAGAGCTAG 2634 0.4093 MFPLFLKNISSAPSFFSSSQVRKRFTRFQVCEFSSSSSPFPPQPPEVSVWWHLDSCPVPSGVSFWKVAPSITAAVRANGIMGKIRIRAYGDFNSPEVDKEALNATNISLYSITNVSFIKPKINTDGKNNTYKHFLMDLNHWVSSKPPPLHLFVIFGNGDFSSSGILHRLRMCNYNILLACPGRAHVALCHAATIMWEWSSMLKGEDLTGKHFNYPPDGPFNSWYGNSNVPLENPFSVAELHTTSQNVEIYKPSLEIKLGENIVKILCSHPIGISMGDLRAELTKCDLPLGKHFYGHNFFSNFLVSMPQLQLEYLGGGNFWVRLFPSTTSVVKNKQMDGAATQKLQNEGKIMDTSADMISRISCVSSEGDDLKSFQSNNDIVKSDDVSFEILEKINPSQNPYTCTDCTMLKNNNIANLEPEKVDNKHEIPTRKEVDGFCRSPFTSTFFSRIRSWWRKLKLFKDSKLSEVDQSSSHPLQPHWDTFRVSVWWDFDSCGVPSDFSFLNVAPSIMGVLRANGIKGPIYIDAYGDVSQLSEIKQEALFLSGVDLHHIPDGMNKNKCFMDWLSRNPPRGHYFLISGDKDFDFSSTLHRTSCFMNGNFLLACPGKAHGYVCKVATIVWQWSSVLKGNYLTGKYIKPLPEWYIKAWVQVPLEYPPGWYRNSKAPRENPFSAAEEPTYSQNAKIHEPSSYIKLFEVQESVSRQVRKVLSSYPNGISIGDLNLQLRVIFDGGLCGCKKFPEILASIPHVQLLYIGDDNFCVRLIRSTTSNVKKKQWAVKNEQRDVNHSGMHALFSTGSFWDDVESFVFTSRGSRLLSRSRSREDLAHRLQKHGSLFFMSLTENKILQLVELLIVEKKWLVESPSQAFPFRLTKSVQKS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2712 877 PANTHER EMB|CAB71880.1 468 785 - -
Mal5g2712 877 PANTHER EMB|CAB71880.1 11 418 - -
Mal5g2712 877 PANTHER EMB|CAB71880.1 768 877 - -
Mal5g2712 877 CDD PIN_limkain_b1_N_like 484 605 - -
Mal5g2712 877 ProSiteProfiles OST-type HTH domain profile. 254 325 IPR025605 -
Mal5g2712 877 PANTHER LIMKAIN B LKAP 468 785 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2712 877 PANTHER LIMKAIN B LKAP 11 418 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2712 877 PANTHER LIMKAIN B LKAP 768 877 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2712 877 Pfam NYN domain 484 584 IPR021139 GO:0004540
Mal5g2712 877 Pfam NYN domain 47 192 IPR021139 GO:0004540
Mal5g2712 877 CDD PIN_limkain_b1_N_like 47 181 - -
Mal5g2712 877 Pfam OST-HTH/LOTUS domain 260 320 IPR025605 -
Mal5g2712 877 Pfam OST-HTH/LOTUS domain 698 749 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2712 Mal-Chr5 79898687 79915246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2712 484 628 C2H2 Transcription Factor Family AT5G61190 35.099 6.45e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2712 - - mtr:MTR_7g077430 1048.11