Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2709 ATGGGAGTTCTTAGAGGTAACGGAATTAAGGGCCCTATTCATATTGACGCTTATGGCGATGTTTCTCAGTTTTCAAAGATGAAACAAGAAGCACTTTTCTCATCCGGCGTTGATCTCCACCACATTCCAGGTGGAAAGAACAAGATCAAATGCTTTACGGATTGGCTTTCTCGAAACCCCCCACCCGGACACCTCTTTTTGATATCTGGTGATAAAGACTTCGACTTCTATGGCGCAGTGTATCGGAACTGGTTCAGGAGAATGGACAACATCTTGCTTGCATGTCCAGGAAAGGCTTATGGTTTTCTCTGCAAAGTAGCAACTATAGTGTGGCAGTGGTCTTTAGTTCTCAAGGGGAATTATCTTACTGGAAAATATATCAGGTATCCTCCTGATTGGTATATTGTGGCGCGGTTGCGGGCACCTCTTGTATATCATCCTGAGTGGTATAGAAACTCGAAGGCGCCTCATGAAAACCCTGATGAGCACACATCTTCACAAAATGCAGAGATCCAAGAACTTTTATATGAAGTTCCAGAGTCAGTTCCTAGGCATGTTAGGAAGGTATTGAGTTTATTCCCGAATGGGATCTCCATTGGAGATCTTAATTTTCTGTTGCGAATGGGTGGTGGTGGAGGCTTATGTGAACATAAAAGGTTTTGCAACATTCTAGCATCTATACCACATGTTCAAGTCTTGTATATAGGAGATGATAATTTTTGTGTACGTTTGATCCCATCAACAACATCTAATGTTAAGAAGAAGCATTGGGCTGTTAAGAATGAGCATGAGCAGAGGGATGTCAATCATTCAGGAATGCCTGTGTTATTTTCTACTGGTTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACGTCTAGAGGATCACATCTTCTTTCCCGGTCAAGAAGCAGGGAAGATCTGGCTCATAGATTACAAAAGAAAGGACCCTTGTGTTTTATGTCTCTCACTGAAAATAAAATCCTTCAATTAGTGGAATTGTTGATAGCGGAGAAGAAATGGTTGGAGGAAACCCCCTCACAAGCATTTCCTTTTAGGATAACTAAATCTGTTCAAAAGAGCTAA 1086 0.4144 MGVLRGNGIKGPIHIDAYGDVSQFSKMKQEALFSSGVDLHHIPGGKNKIKCFTDWLSRNPPPGHLFLISGDKDFDFYGAVYRNWFRRMDNILLACPGKAYGFLCKVATIVWQWSLVLKGNYLTGKYIRYPPDWYIVARLRAPLVYHPEWYRNSKAPHENPDEHTSSQNAEIQELLYEVPESVPRHVRKVLSLFPNGISIGDLNFLLRMGGGGGLCEHKRFCNILASIPHVQVLYIGDDNFCVRLIPSTTSNVKKKHWAVKNEHEQRDVNHSGMPVLFSTGSFWDDVESFVFTSRGSHLLSRSRSREDLAHRLQKKGPLCFMSLTENKILQLVELLIAEKKWLEETPSQAFPFRITKSVQKS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2709 361 PANTHER LIMKAIN B LKAP 4 263 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2709 361 PANTHER LIMKAIN B LKAP 260 361 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2709 361 PANTHER EMB|CAB71880.1 4 263 - -
Mal5g2709 361 PANTHER EMB|CAB71880.1 260 361 - -
Mal5g2709 361 CDD PIN_limkain_b1_N_like 3 96 - -
Mal5g2709 361 Pfam OST-HTH Associated domain 303 358 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2709 Mal-Chr5 79614516 79620593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2709 11 119 C2H2 Transcription Factor Family AT5G61190 41.739 3.64e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2709 - - mtr:MTR_7g077430 478.789