Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2708 ATGGGTAAAATTCGTATTCGCGCTTATGGCGATTTTAATTCTCCAGAGGTCGACAAAGAGGCTCTTAATGCAACCAACATTTCTCTATACTCCATTACCAATGTGTCTTTTATCAAACCAAAAATAAATACCGATGGAAAGAACAATACATATAAGCATTTTCTTATGGATCTTAATCATTGGGTTTCCTCAAAACCTCCACCCCTACACCTCTTTGTGATATTTGGTAATGGAGACTTCTCTAGCAGTGGCATATTGCACCGGTTAAGAATGTGCAACTACAATATCTTGCTTGCATGTCCAGGAAGGGCTCATGTTGCTCTCTGCCATGCAGCAACTATAATGTGGGAGTGGTCTTCGATGCTCAAGGGGGAAGACCTTACAGGAAAACATTTCAACTATCCTCCTGATGGTCCGTTTAATTCCTGGTATGGAAACTCAAATGTGCCTCTTGAAAACCCCTTCTCAGTTGCTGAGTTGCACACAACTTCACAAAATGTGGAGATTTACAAACCTTCCTTGGAGATTAAGTTAGGTGAAAATATTGTGAAAATATTGTGTTCGCACCCAATAGGGATCTCCATGGGAGATCTTCGTGCAGAGTTGACAAAGTGTGATCTGCCTTTGGGTAAACACTTCTATGGTCATAATTTTTTTTCCAACTTTCTAGTATCTATGCCACAATTACAACTCGAGTATTTAGGAGGAGGTAATTTTTGGGTGCGTTTGTTCCCATCCACAACATCTGTTGTTAAGAATAAGCAGATGGATGGTGCCGCAACTCAAAAGCTACAAAATGAGGGTAAAATTATGGATACAAGTGCAGACATGATTTCTAGAATATCGTGTGTTAGCAGCGAGGGTGATGATTTAAAATCATTCCAATCTAACAATGACATTGTTAAGTCCGATGATGTAAGTTTTGAAATTCTGGAAAAAATAAACCCTTCACAGAATCCCTATACTTGTACTGATTGCACCATGTTGAAAAACAATAATATAGCAAATCTTGAACCCGAAAAAGTAGACAACAAACATGAGATTCCAACTAGAAAGGAGGTTGATGGATTTTGTCGTAGCCCATTTACGTCAACTTTCTTTAGTAGGATTAGGAGTTGGTGGAGAAAGCTTAAGTTGTTTAAGGATTCAAAGTTATCTGAAGTAGACCAGAGTTCTAGTCATCCTCTCCAGCCTCATTGGGATACCTTTAGGGTTTCAGTATGGTGGGACTTTGACAGCTGCGGTGTCCCTTCTGACTTTAGCTTTTTGAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGAATTAAGGGCCCTATTTATATTGACGCTTATGGCGATGTTTCTCAACTTTCAGAGATCAAACAAGAAGCACTTTTCTTATCTGGCGTTGATCTCCATCACATTCCAGGCCATCTCTTATCCGATGTGGGACAATTTAACACACCCCCTCACGCGCAGGCCTGGACATCTGGAGCGTGGATATAA 1494 0.4016 MGKIRIRAYGDFNSPEVDKEALNATNISLYSITNVSFIKPKINTDGKNNTYKHFLMDLNHWVSSKPPPLHLFVIFGNGDFSSSGILHRLRMCNYNILLACPGRAHVALCHAATIMWEWSSMLKGEDLTGKHFNYPPDGPFNSWYGNSNVPLENPFSVAELHTTSQNVEIYKPSLEIKLGENIVKILCSHPIGISMGDLRAELTKCDLPLGKHFYGHNFFSNFLVSMPQLQLEYLGGGNFWVRLFPSTTSVVKNKQMDGAATQKLQNEGKIMDTSADMISRISCVSSEGDDLKSFQSNNDIVKSDDVSFEILEKINPSQNPYTCTDCTMLKNNNIANLEPEKVDNKHEIPTRKEVDGFCRSPFTSTFFSRIRSWWRKLKLFKDSKLSEVDQSSSHPLQPHWDTFRVSVWWDFDSCGVPSDFSFLNVAPSIMGVLRANGIKGPIYIDAYGDVSQLSEIKQEALFLSGVDLHHIPGHLLSDVGQFNTPPHAQAWTSGAWI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2708 497 PANTHER LIMKAIN B LKAP 388 473 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2708 497 PANTHER LIMKAIN B LKAP 2 299 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal5g2708 497 CDD PIN_limkain_b1_N_like 2 101 - -
Mal5g2708 497 ProSiteProfiles OST-type HTH domain profile. 174 245 IPR025605 -
Mal5g2708 497 CDD PIN_limkain_b1_N_like 404 488 - -
Mal5g2708 497 PANTHER EMB|CAB71880.1 388 473 - -
Mal5g2708 497 PANTHER EMB|CAB71880.1 2 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2708 Mal-Chr5 79611143 79613705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2708 404 473 C2H2 Transcription Factor Family AT5G61190 37.143 5.55e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2708 - - mtr:MTR_7g077430 604.749