Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2705 ATGTCTCCGCCACTGCTGCTTCCTGAAGAGGAAGGGCAGAGCAACACCTCACCGGTAGCATCTGCATCTCCACAATCCTTGGACCGTTTCTCCCAAACTGGGGCTGGATTGAAAGAACGCAATTACCTTGGATTGTCTGATAGCTCATCGGTGGATAGTTCTACTGTCCCAAGCTTGTCTGATGAGAAAAAGGTGAACCTAAATTTGAAAGCTACAGAGTTAAGGCTCGGACTTCCTGGATCCCAGTCACCTGAAAGGGATCTCGATCTTTTTTCGTTGAACTCAACAAAACTTGACGAGAAACCGCTGTTCCCTTTGCTTCCCACAAAAGATGGAATTTGCTCATTGTCCCAGAAAACTGTTGTTTCAGGCAACAAAAGAGGTTTCGCCGATACAATTGATGTGTTCCCTGAGGCGAAATATACTGGTAATACACGTGTAAACATACTGCTCTCGCCGAGACCTTCTGGAGCTCAACCTACTACAATCAAAGAAATACCAAAGAAGGTGTTACAAGAGAGCCCTTGTGCAGCAAATGGATCTGGAACTCCCAATAGTGGCAGTGCGCCGGCTGCTAAAGCACAAGTTGTCGGTTGGCCTCCTATTAGATCATTTAGGAAAAACTCATTGGCCACCACATCAAAGAACAATGACGAAGTCGATGGAAAACCAGGTCCAGCTGCACTCTTTGTGAAGGTTAGCATGGACGGTGCTCCTTATCTTAGGAAGGTAGATCTAAGAAACTATACAACGTACCAGGAACTGTCTTCTGACCTTGAGAAGATGTTCAGCTGTTTTACCTTAGGTCAATGTGGTTCTCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAAGGACTTCCTGCATGGTTCTGAATATGTGGTCACTTATGAAGATAAAGACGGTGACTGGATGCTTGTTGGAGATGTACCGTGGGACATGTTCATTGACACATGCAAAAGGCTGAAAATCATGAAGGGTTCCGATGCAATTGGCTTAGCTCCCAGGGCTATGGAAAAATCCAAGAGCAGGAGCTAG 1047 0.4594 MSPPLLLPEEEGQSNTSPVASASPQSLDRFSQTGAGLKERNYLGLSDSSSVDSSTVPSLSDEKKVNLNLKATELRLGLPGSQSPERDLDLFSLNSTKLDEKPLFPLLPTKDGICSLSQKTVVSGNKRGFADTIDVFPEAKYTGNTRVNILLSPRPSGAQPTTIKEIPKKVLQESPCAANGSGTPNSGSAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRNYTTYQELSSDLEKMFSCFTLGQCGSHGAPGREMLSESKLKDFLHGSEYVVTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2705 348 MobiDBLite consensus disorder prediction 9 32 - -
Mal5g2705 348 ProSiteProfiles PB1 domain profile. 228 332 IPR000270 GO:0005515
Mal5g2705 348 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 341 IPR003311 GO:0005634|GO:0006355
Mal5g2705 348 MobiDBLite consensus disorder prediction 176 190 - -
Mal5g2705 348 Gene3D - 225 342 - -
Mal5g2705 348 MobiDBLite consensus disorder prediction 1 33 - -
Mal5g2705 348 MobiDBLite consensus disorder prediction 174 193 - -
Mal5g2705 348 Pfam AUX/IAA family 72 339 IPR033389 -
Mal5g2705 348 PANTHER AUXIN-INDUCED PROTEIN 2 341 - -
Mal5g2705 348 SUPERFAMILY CAD & PB1 domains 226 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2705 Mal-Chr5 79569796 79573644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2705 232 338 B3 DNA Binding Superfamily AT4G23980 30.841 3.16e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal5g2705 AUX_IAA 1.3e-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2705 K14484 - gmx:100500373 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0731 6 10782422 10785826 Mal5g2705 5 79569796 79573644 PCT