Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2668 ATGAATGTTACTCGTTCTGCTTTGATGCTCCATTTTCAAACCTCGCCAATTCGCTACCATCAATTATTCTTCTTCTCTCGATTCAACAATGCTCTTATTCGCAATCCCAATTCTTCCTCTTCTCTCTTCAATTTCAATTCAACACGTTTCTTTTCTGTAACCCTTCCACGACAAACGCAGCAGACACAACCCTTTGTTGCATCAGAAGACACTTTCTTTGCTGAAGATAACGTTTCGTGGAGTTCACTTGGTCTTTCTCATACTCTTTCTCATGCTCTCTGTGATATTGGTCTCAAAACACCCTCTATTGTTCAGGCTTCTTCTATACCATCTGTGTTGTCAGGGAAGGATGTTGTTATTGCTGCGGAGACCGGCAGTGGTAAGACATACAGTTATCTACTTCCTCTCATTCATAAGCTGAGGGGTACAGAGGAACATTCTCTTGATGTTGTATCTGATAAACAAGTCTATCCCCCGCCCAGGAAAGTTCTGCTCGTGCTTTGTCCGAATGTCCAATTGTGTGAGCAGGTAGTTAGGATGGCTAATAGTCTCCGTGGAGACAATCGTGAAACCATAGTTACTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCAGGAACCTGATATCATTGTGACGACACCTGCTGCTCTTCTCAATCATGTTGACGTTGACAGAAGACGCCGCATGGAATTTATGCACGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAAGTAATCCGCCTGATTAACTTGCTCCGCTATGATGAAAAAGTTTTGTCTCGATCAAAAACATCAGTATCAGAGTTGCCAATGATACTGGAATCTTCTTTGTCGCCGCACGATGCTTCGGAAGGTGAAGAGGAATTTCCAACTGAAGCCATGTCAGACGAGGAGGAGGATGATAACAAGGACATTGTCATTATTAATAACGAAGATGAATCTGTCAAGAAAACAAAAAGCGACTGGAGAAGAGTGAGGAAACATTTTGAGCGTAGTAAACAGTATGTTTTTGTTGCAGCTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATCGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAACTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGATGGTGGCATTCATAGAACAATGGTGTTTGCCAACACTGTTGAGGCTGTTGAAGCTGTGGTGAAGATATTGGGCTATCCTGGGATTGAATGTTTACGTTATCATAAGAATTGCACATTGGATGAGCGGGCACAAACATTAGTTGATTTCCACGAGAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGTGTGGATATTCCAAATGTTTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGACGTACAGCTAGAGCCGGTCAAATTGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCAGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAAACCGCATTTAGCAGGAAAAGAGGCTTCCGTAACAAGATCAAAAAGAAAGCAAGAGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCTTGA 1749 0.426 MNVTRSALMLHFQTSPIRYHQLFFFSRFNNALIRNPNSSSSLFNFNSTRFFSVTLPRQTQQTQPFVASEDTFFAEDNVSWSSLGLSHTLSHALCDIGLKTPSIVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIHKLRGTEEHSLDVVSDKQVYPPPRKVLLVLCPNVQLCEQVVRMANSLRGDNRETIVTAAAICGKQGWPIQEPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKVLSRSKTSVSELPMILESSLSPHDASEGEEEFPTEAMSDEEEDDNKDIVIINNEDESVKKTKSDWRRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHRHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNDGGIHRTMVFANTVEAVEAVVKILGYPGIECLRYHKNCTLDERAQTLVDFHEKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRGFRNKIKKKARANKVRDSATIEESLTA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2668 582 Gene3D - 53 370 IPR027417 -
Mal5g2668 582 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 109 372 IPR014001 -
Mal5g2668 582 Pfam Helicase conserved C-terminal domain 424 517 IPR001650 -
Mal5g2668 582 Gene3D - 389 582 IPR027417 -
Mal5g2668 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 529 IPR027417 -
Mal5g2668 582 MobiDBLite consensus disorder prediction 289 314 - -
Mal5g2668 582 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 22 61 552 - -
Mal5g2668 582 SMART helicmild6 437 517 IPR001650 -
Mal5g2668 582 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 61 552 - -
Mal5g2668 582 MobiDBLite consensus disorder prediction 300 314 - -
Mal5g2668 582 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 400 565 IPR001650 -
Mal5g2668 582 Pfam DEAD/DEAH box helicase 104 266 IPR011545 GO:0003676|GO:0005524
Mal5g2668 582 CDD SF2_C_DEAD 388 526 - -
Mal5g2668 582 CDD DEADc 89 271 - -
Mal5g2668 582 SMART ultradead3 97 391 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2668 Mal-Chr5 78077213 78090098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2668 387 545 Eukaryotic Initiation Factors Gene Family AT5G11170 27.586 8.24e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2668 - - gmx:100780518 814.298