Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2652 ATGATGATGTCATCATCAGGTGGCGGAGCATTCCGGCTACGTTGGGATGTGTTTTTGAGTTTCAGGGGAGAAGATACTCGCGAATGTTTCACCAAAAAACTGTACGAATCATTACACAAACAAGGTATTCGTGCTTTCATGGATGATGAGGGTTTGGACCGTGGGGACCACATAGCTACTCGTTTGCTTGAAGCAATTGATGATTCTGCTGCTTCCATTGTTATCATCTCACCTAACTATGCTGATTCTCATTGGTGTCTTGATGAACTCAACAGGATTTGTGATCTCAACAGGCTTCTTATTCCTGTTTTCTATAGAGTTGATCCATCTCATGTTCGGAAACAATTGGGTCCTTTTGAAGATGGGTTTAAGTATCTTGAAAACAGGTTTGGAAATGAGGATGGTAGGGTTAAGAAGTGGAGAGAATCTATGCTTAAACTTGGTGGTGTTGCTGGCTTTGTTTTCAATTCTAGTGATGATGGCGAGCATGAGAATCTGATACGCCGTTTGGTACAAAGGGTTTTGAGGGAGTTAAGTAATACTCCAATGGTTGTGGCTGAGTTTGCAGTGGGTATCAATGAACGTGTTGAGAAGGTGATGGATCTCTTACAAGTTCATTCCAAAGGTGTCAAGGTTTTGGGGTTATATGGTATGGGTGGTGTTGGTAAGACAACCCTTGCGAAGGCTCTTTTCAATAGTCTTGTCGGTCATTTCGAGCGTAGATGCTTCATTTCCAATGTGAGACAAGTTTCCTCTACAGAAGATGGTTTGGTTTCTCTCCAAAGCAATGTCATTAAAGATCTTTCTTCAAACGAAGGACCTCAGAGTTTTATCGGTGATGTCAATGATGGTATTTCTGTTATCAAAAGTATAGTTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATGGAGGAAGTTGTATAATAATTACGACAAGGGATACAACTGTTTTGCCTGAAAAACTTGTCAATAAGTTATATGAAGTTACAGAGTTGCATACTGAAGAAGCTCTAGAGTTATTTAGTTACCATGCACTAAGGAAAAAGGAACCTCCACAAAATTTTATGAGTTTTTCAAACCAAATTGTGTCTCTTACAGGTAGAATGCCATTGGCTTTGGAAGTGTTCGGTTGCTTTCTATTTGGGAAGAGAAGGGTGGAGGAATGGGAGGATGCTGTTGAGAAGCTGAGAACAATTCGGCCCGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAGATGGGAATGAAGCGTGACGATGTGATTGATGTATTGAGAGGTTGTGGTTTTAAAGGAGAGATAGGTTTGATGATCCTTGTGGAAAAATGCTTAATCAAAATAAGACAGGATAATACCTTGTGGATGCATGATCAAATTAGAGATATGGGAAGACAGATTGTTATGGCTGAAAACCGTGTTGATCCTGGGATGCGTAGTCGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGGATTGTACTAGACTTTAAGGAAATATCAAATCCTCAACCTCAAGAAGAGAAATATAATCAAGTTATACTTGATGCAAAATCCTTTGAACCGATGGTTAGCTTGAGATTGCTTCAGATCAATAATCTGAGTTTGGAAGGAAAGTTTCTTCCAGATGAACTGAAGTGGCTACAATGGCGAGGATGTCCTTTAGAATGCATACCTTTGTACACTTTGCCACGTGAACTGGCTGTCCTTGATCTCTCAAATGGCAAGAAAATTAAAAGCTTGTGGGGATTGGAAAGTCACAAGCAGGCACCAGAGAACCTAATGGTCATGAACCTCTCTAACTGCTCCCAACTTGCTGCAATCCCTGATTTATCTTGGTGTCTCAGGCTAGAAAAAATTGATTTGGAGAACTGCATCAATCTAACAAGGATTCATGAATCCATTAGCAGTTTAACTACCTTGCGTGATTTGAATTTGACGTATTGTAAAAACATCATTGAACTTCCTAGTGATGTATCTGGACTAAAACATCTGGAGAGCCTCATTCTTTCTAAATGCTATGAGTTGAAAGCATTACCAGAAAATATAGGCATGCTTAAATCACTGAAAACACTTGCTGTTGATGATACTGCTATAGTAAAGTTACCTGAGTCCATTTTTCGCTTGACCAAACTTGAACGACTTGTTTTAGACCGTTGTAAATATTTGGGAAGACTACCAAACTGCATTGGAAAACTATGTTCTTTGCTAGAATTATCTCTTAATAATTCAGGCTTACAAGAATTACCGAACACTGTCGGTTCCTTGAAAAACCTTGAGAAATTAAGTTTGATTTGGTGTAAATCTCTCATTCTAATGCCTGATTCTATAGGAAACCTCGAATCGTTGACAGAACTTTTGGCTTACAACAGTGGAATTACAGAACTCCCTTCCACCATTGGTTCTTTATCCTATCTGAGGACCTTATCAGTTGGAAAGTGTAAACTTAGTAAATTGCCCGACTCATTTAAAAATCTGGCCTCAATTATTGAACTTGACTTAGATGGAACATATATGAGATATCTGCCAGATCAGATTGGAGAGTTGAAACAACTTAGGAAACTTGAGATTGGGAATTGTAGCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGCATCTCTTAATACACTGAACATAATCAATGGAAATATCAGAGAATTGCCAGCATCGATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACAACTTCCAGCTTCTATAGGAAACCTGAAGTCTCTATGTCATTTAAAGATGGAGGAAACAGCTATGACAGTCTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGAACACTCAGGATGGCAAAGAGGCCTCATTTAGTTCCCTTATCTGTGGAGAACACTGGCTCTTTTGTGTTACCGCCTTCTTTCTGTAATCTGACCTTGCTACATGACTTGGATGCCCGTGCCTGGAGATTACCGGGAAAAATTCCGGACGATTTCAAGAAGCTGTCATTATTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCGTCCAGTTTGAAAGGTCTTTCCTTTCTCAATAAGCTCTTACTACCAAATTGCACAGAACTGATTTCTCTCCCCTCGCTTCCTTCAAGTTTGATTGAGTTAGATGCTGATAATTGTTATGCATTAGAAACTATACATGACATGTCAAATTTAGAGAGTTTGGAGGAATTGAAACTCACAAACTGCGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCAATGCATGCTCCTCCAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCGGGAACTAAATTACCTGAATGGTTATCAAGAGAAACTTTAAGCTTTTCCAACCGCAAAAATCTCGAGCTAAAAAGTGTAATTGTAGGTGTTATTTTCTCAATTAACCATAACAATATGAATAGTCAAATTTCTGAAGTGGTTGATGTTCAAGCAAAGGTTCTCAAACTAGGCAACTTTATTTTTAGTTCAGTGCTAAAGATAGGCGGAGTGCCAAGAACAGATGAACAGGTCATACATTTGCGAAGGTTCCATGATTACCATCCATTGGTATCCCTTTTAAAAGATGCTGATACAGTTTGTGTGGCAAAGAGAAATCTTCCTTTTGATGAGAGGTTGGAGTTGAAAAAATATGGAGTTCATTTAATCTTTGAAGGGGATGATGATTATGAAGGAGATGAAGAATCGTTGGACCAAGGCTTACAATCTGTTTCAGAAAGGTTGGCCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGCCACTGAGACTGAGAGTGAAGATGATCAGGGTCAACATGAATTGGAGGAGGAAAAAGAAGAGGCTGGAACTAGATTACTTTGTGTTAAAGGCAATTCCATTCTTGTCTTTCTGCTTAATCTATTCTTTGTGCTGTTGGGTTGGTTTTGGTTGAGGTGTATGTTAAGTTCTGAAAGAAAAGATTGA 4185 0.389 MMMSSSGGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHKQGIRAFMDDEGLDRGDHIATRLLEAIDDSAASIVIISPNYADSHWCLDELNRICDLNRLLIPVFYRVDPSHVRKQLGPFEDGFKYLENRFGNEDGRVKKWRESMLKLGGVAGFVFNSSDDGEHENLIRRLVQRVLRELSNTPMVVAEFAVGINERVEKVMDLLQVHSKGVKVLGLYGMGGVGKTTLAKALFNSLVGHFERRCFISNVRQVSSTEDGLVSLQSNVIKDLSSNEGPQSFIGDVNDGISVIKSIVRENRVLLVLDDVDNVNQLDALIGKREWFYGGSCIIITTRDTTVLPEKLVNKLYEVTELHTEEALELFSYHALRKKEPPQNFMSFSNQIVSLTGRMPLALEVFGCFLFGKRRVEEWEDAVEKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFKGEIGLMILVEKCLIKIRQDNTLWMHDQIRDMGRQIVMAENRVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKEISNPQPQEEKYNQVILDAKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLECIPLYTLPRELAVLDLSNGKKIKSLWGLESHKQAPENLMVMNLSNCSQLAAIPDLSWCLRLEKIDLENCINLTRIHESISSLTTLRDLNLTYCKNIIELPSDVSGLKHLESLILSKCYELKALPENIGMLKSLKTLAVDDTAIVKLPESIFRLTKLERLVLDRCKYLGRLPNCIGKLCSLLELSLNNSGLQELPNTVGSLKNLEKLSLIWCKSLILMPDSIGNLESLTELLAYNSGITELPSTIGSLSYLRTLSVGKCKLSKLPDSFKNLASIIELDLDGTYMRYLPDQIGELKQLRKLEIGNCSNLESLPESIGHLASLNTLNIINGNIRELPASIGLLENLVTLTLNKCRMLKQLPASIGNLKSLCHLKMEETAMTVLPESFGMLSSLRTLRMAKRPHLVPLSVENTGSFVLPPSFCNLTLLHDLDARAWRLPGKIPDDFKKLSLLETLNLGQNNFHSLPSSLKGLSFLNKLLLPNCTELISLPSLPSSLIELDADNCYALETIHDMSNLESLEELKLTNCEKVVDIPGLECLKSLRRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWLSRETLSFSNRKNLELKSVIVGVIFSINHNNMNSQISEVVDVQAKVLKLGNFIFSSVLKIGGVPRTDEQVIHLRRFHDYHPLVSLLKDADTVCVAKRNLPFDERLELKKYGVHLIFEGDDDYEGDEESLDQGLQSVSERLARFFNTCDEGVDATETESEDDQGQHELEEEKEEAGTRLLCVKGNSILVFLLNLFFVLLGWFWLRCMLSSERKD* 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2652 1394 Gene3D Ribonuclease Inhibitor 1007 1227 IPR032675 -
Mal5g2652 1394 SUPERFAMILY L domain-like 491 907 - -
Mal5g2652 1394 Gene3D Ribonuclease Inhibitor 726 835 IPR032675 -
Mal5g2652 1394 Gene3D Ribonuclease Inhibitor 836 1006 IPR032675 -
Mal5g2652 1394 Pfam NB-ARC domain 194 420 IPR002182 GO:0043531
Mal5g2652 1394 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 152 IPR035897 -
Mal5g2652 1394 Gene3D - 349 434 IPR042197 -
Mal5g2652 1394 PRINTS Disease resistance protein signature 894 910 - -
Mal5g2652 1394 PRINTS Disease resistance protein signature 212 227 - -
Mal5g2652 1394 PRINTS Disease resistance protein signature 291 305 - -
Mal5g2652 1394 PRINTS Disease resistance protein signature 384 398 - -
Mal5g2652 1394 Gene3D - 178 342 IPR027417 -
Mal5g2652 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 444 IPR027417 -
Mal5g2652 1394 PANTHER TMV RESISTANCE PROTEIN N-LIKE 12 1287 - -
Mal5g2652 1394 Gene3D - 13 177 IPR035897 -
Mal5g2652 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1287 IPR044974 GO:0006952
Mal5g2652 1394 SUPERFAMILY L domain-like 890 1189 - -
Mal5g2652 1394 Gene3D Ribonuclease Inhibitor 542 725 IPR032675 -
Mal5g2652 1394 Pfam TIR domain 15 181 IPR000157 GO:0007165
Mal5g2652 1394 ProSiteProfiles TIR domain profile. 13 175 IPR000157 GO:0007165
Mal5g2652 1394 SMART LRR_typ_2 920 943 IPR003591 -
Mal5g2652 1394 SMART LRR_typ_2 873 896 IPR003591 -
Mal5g2652 1394 SMART LRR_typ_2 780 803 IPR003591 -
Mal5g2652 1394 SMART LRR_typ_2 827 850 IPR003591 -
Mal5g2652 1394 SMART LRR_typ_2 1048 1070 IPR003591 -
Mal5g2652 1394 SMART LRR_typ_2 733 756 IPR003591 -
Mal5g2652 1394 SMART till_3 14 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2652 Mal-Chr5 77245116 77252158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2652 804 946 WRKY Transcription Factor Family AT4G12020 34.028 1.32e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2652 - - mtr:MTR_8g062130 2248.01