Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2650 ATGATGATGTCATCATCAGGTGGCGGAGCATTCCGGCTACGTTGGGATGTGTTTTTGAGTTTCAGGGGAGAAGATACTCGCGAATGTTTCACCAAAAAACTGTACGAATCATTACACAAACAAGGTATTCGTGCTTTCATGGATGATGAGGGTTTGGACCGTGGGGACCACATAGCTACTCGTTTGCTTGAAGCAATTGATGATTCTGCTGCTTCCATTGTTATCATCTCACCTAACTATGCTGATTCTCATTGGTGTCTTGATGAACTCAACAGGATTTGTGATCTCAACAGGCTTCTTATTCCTGTTTTCTATAGAGTTGATCCATCTCATGTTCGGAAACAATTGGGTCCTTTTGAAGATGGGTTTAAGTATCTTGAAAACAGGTTTGGAAATGAGGATGGTAGGGTTAAGAAGTGGAGAGAATCTATGCTTAAACTTGGTGGTGTTGCTGGCTTTGTTTTCAATTCTAGTGATGATGGCGAGCATGAGAATCTGATACGCCGTTTGGTACAAAGGGTTTTGAGGGAGTTAAGTAATACTCCAATGGTTGTGGCTGAGTTTGCAGTGGGTATCAATGAACGTGTTGAGAAGGTGATGGATCTCTTACAAGTTCATTCCAAAGGTGTCAAGGTTTTGGGGTTATATGGTATGGGTGGTGTTGGTAAGACAACCCTTGCGAAGGCTCTTTTCAATAGTCTTGTCGGTCATTTCGAGCGTAGATGCTTCATTTCCAATGTGAGACAAGTTTCCTCTACAGAAGATGGTTTGGTTTCTCTCCAAAGCAATGTCATTAAAGATCTTTCTTCAAACGAAGGACCTCAGAGTTTTATCGGTGATGTCAATGATGGTATTTCTGTTATCAAAAGTATAGTTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATGGAGGAAGTTGTATAATAATTACGACAAGGGATACAACTGTTTTGCCTGAAAAACTTGTCAATAAGTTATATGAAGTTACAGAGTTGCATACTGAAGAAGCTCTAGAGTTATTTAGTTACCATGCACTAAGGAAAAAGGAACCTCCACAAAATTTTATGAGTTTTTCAAACCAAATTGTGTCTCTTACAGGTAGAATGCCATTGGCTTTGGAAGTGTTCGGTTGCTTTCTATTTGGGAAGAGAAGGGTGGAGGAATGGGAGGATGCTGTTGAGAAGCTGAGAACAATTCGGCCTGGGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCCTGTTTGTTTATTCAAATGGGAATAAAGCGTGACGATGTGATTGATGTATTGAGAGGTTGTGGTTTTAGAGGAGAGATAGGTTTGATGATCCTTGTGGAAAAATGCTTAATCAAAATAAGACAGGATAATACCTTGTGGATGCATGATCAAATTAGAGATATGGGAAGACAGATTGTTATGGCTGAAAACCGTGTTGATCCTGGGATGCGTAGTCGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAATTGTACTAGACTTTAAGGAAAGATCAAACCAGTGGAGTACAGATTATCCTCCTCAACCTCAAGCAAAGAAATATAACCAAGTTATTGTTAATACAAAATCCTTTGAACAAATGGTTACCTTGAGATTGCTTCAGATCAATAATCTGAGTCTGGAAGGCAAGTTTCTTCCAGATGAACTGAAGTGGCTACAATGGCGAGGATGTCCTTTAGAATGCGTATCTTTGGACACTTTGCCACGTGAATTGGCTGTCCTTGATCTCTCAAATGGCCAGAAAATCAAAAGCTTGTGTGGATTGGAAAGTCACGAGGTACCGGAGAACCTTATGGTCATGAACCTCTCTGACTGCTTCCAACTGGCTGCAATCCCTGATTTATCTTGGTGTCTCAGGCTAGAGAAAATTAATTTGGAGAACTGTGTTAATCTAAAATTGATTCATGAATCAATTGGCAGTTTGACTACCTTGCGTAATTTGAATTTGACGCGTTGTGAAAACATCATTGAACTTCCTAGTGATGTATCTGGGCTGAAACATCTGGAGAGCCTCATTCTTTCTAGGTGCACCAAGTTGAAAGCATTACCAGAAAAGATAGGCTTGCTTAAATCACTGAAAACACTTATTGCTGATAAAACTGCTATAGTAAAGTTGCCCGAGTCCGTTTTTTGCTTGATCAAACTTGAACGACTTATTTTAGACCGTTGTTCATATTTGGAAAGACTACCAAACTGCATTGGAAAACTATGTTCATTGCAAGAATTATCTCTTAATGAATCAGGTTTACAAGAATTACCCAATACTATTGGTTCCTTGAAAAATCTTGAGAAGTTAAGTTTGAATTGGTGTGAGTCTCTCACTCTAATTCCTGATTCTATAGGAAATCTTGAATCGTTGACTGAACTTTCGGCTTACAACAGTGGAATTAAAGAACTCCCTTCCACCATTGGTTCTTTATTCTATCTGAGGACGTTATCTGTTGGAAAGTGTAAACCTCTCAGTAAATTGCCCGAATCATTCAAAACTCTGGCCTCAATTATTGAACTTGACTTAGATGGAACATATATCAGATATCTGCCAGGTCAGATTGGAGAGTTGAAGCAGCTTAGGAAACTTGAGATTGGGAATTGTAGCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGCATCTCTTGATACATTGAACATAATCAATGGAAATATCAGAGAATTGCCAGCATCGATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACAACTTCCAGCTTCTATAGGAAACATAAAGTCTCTATGTCATTTAAAGATGGAGGAAACAGCTATGACAATCTTGCCTGAAAGTTTTGGTATGCTCTCAAGCTTGAGAACACTCAGAATGGCAAAGAGGCCTCATTTAGTTCCCTTACCTGTGGAGAACACTGGATCTTTTGTGTTACCGCATTCTTTCTGTAATCTAACCTTGCTACATGAGTTGGATGCCCGTGCCTGGAGATTATCGGGAAAAATTCCGGACGATTTTGAGAAGCTATCATTATTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCATCCAGTTTGAAAGGTCTTTTCTTTCTCAAGAAGCTCTTACTGCCAAATTGCACGGAACTGATTTCACTCCCCTCACTTCCTTCAAGTTTGATTGAGTTAAATGCTGATAATTGTTATGCATTAGAAACTATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAACTCACAAATTGCGAAAAAGTGGCGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCAATGCATGCTCCTCCAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCAAAAGAAACTGTAAGCTTTTCCAATCGCAAAAATCTCGAGCTAACAAGTGTAGTTGTAGGTGTTGTTGTATCAATTAACCACAATATTCATATACCTATAAAGAGAGATGAAATGCCTGGAATCATTGATGTTGAAGCAAATGTCTTCAAACTTGGGAAACGAATCTTTAATACAGTGTTAAACATACGTGGGGTGCCAAGGACAAATGTAGATCACATACACTTGTGTAGGTTCAAGAATTACCATCCATTAGTAGCATTTTTAAAAGATGCTGATACATTGCGTGTGACTACGAGAAGTCCTCCTTTTGATAAAGGATTGAAGTTGAAGAAATGCGGAGTTCACTTAATCTTTGAAGGGGATGATGATTATGATGGAGATGAAGAATCGTTGGACAACGGTTTGCAATCTGTTTCAGAAAGGTTGGCCAGGTTTTTTAACACTTGTGATGAAGATGTTGATGCCACTGAGTGTGAAGATGAGTGTCAACAAGAATTGGATCAGGAAAATGGAAAGCCTGGAACTAGATCACTTTGTGTTAAAGGCAATTACATTATTCTCTGTCTGTTTAGTTTATTATTTGTGCTGTTTAGTTGGTTATGGTTGAGGTGTATGCCAAGTGCTGAAAGAAAAGCTTGA 4209 0.3875 MMMSSSGGGAFRLRWDVFLSFRGEDTRECFTKKLYESLHKQGIRAFMDDEGLDRGDHIATRLLEAIDDSAASIVIISPNYADSHWCLDELNRICDLNRLLIPVFYRVDPSHVRKQLGPFEDGFKYLENRFGNEDGRVKKWRESMLKLGGVAGFVFNSSDDGEHENLIRRLVQRVLRELSNTPMVVAEFAVGINERVEKVMDLLQVHSKGVKVLGLYGMGGVGKTTLAKALFNSLVGHFERRCFISNVRQVSSTEDGLVSLQSNVIKDLSSNEGPQSFIGDVNDGISVIKSIVRENRVLLVLDDVDNVNQLDALIGKREWFYGGSCIIITTRDTTVLPEKLVNKLYEVTELHTEEALELFSYHALRKKEPPQNFMSFSNQIVSLTGRMPLALEVFGCFLFGKRRVEEWEDAVEKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACLFIQMGIKRDDVIDVLRGCGFRGEIGLMILVEKCLIKIRQDNTLWMHDQIRDMGRQIVMAENRVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFKERSNQWSTDYPPQPQAKKYNQVIVNTKSFEQMVTLRLLQINNLSLEGKFLPDELKWLQWRGCPLECVSLDTLPRELAVLDLSNGQKIKSLCGLESHEVPENLMVMNLSDCFQLAAIPDLSWCLRLEKINLENCVNLKLIHESIGSLTTLRNLNLTRCENIIELPSDVSGLKHLESLILSRCTKLKALPEKIGLLKSLKTLIADKTAIVKLPESVFCLIKLERLILDRCSYLERLPNCIGKLCSLQELSLNESGLQELPNTIGSLKNLEKLSLNWCESLTLIPDSIGNLESLTELSAYNSGIKELPSTIGSLFYLRTLSVGKCKPLSKLPESFKTLASIIELDLDGTYIRYLPGQIGELKQLRKLEIGNCSNLESLPESIGHLASLDTLNIINGNIRELPASIGLLENLVTLTLNKCRMLKQLPASIGNIKSLCHLKMEETAMTILPESFGMLSSLRTLRMAKRPHLVPLPVENTGSFVLPHSFCNLTLLHELDARAWRLSGKIPDDFEKLSLLETLNLGQNNFHSLPSSLKGLFFLKKLLLPNCTELISLPSLPSSLIELNADNCYALETIHDMSNLESLEELKLTNCEKVADIPGLECLKSLRRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSKETVSFSNRKNLELTSVVVGVVVSINHNIHIPIKRDEMPGIIDVEANVFKLGKRIFNTVLNIRGVPRTNVDHIHLCRFKNYHPLVAFLKDADTLRVTTRSPPFDKGLKLKKCGVHLIFEGDDDYDGDEESLDNGLQSVSERLARFFNTCDEDVDATECEDECQQELDQENGKPGTRSLCVKGNYIILCLFSLLFVLFSWLWLRCMPSAERKA* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2650 1402 Gene3D Ribonuclease Inhibitor 1014 1210 IPR032675 -
Mal5g2650 1402 Pfam NB-ARC domain 194 420 IPR002182 GO:0043531
Mal5g2650 1402 Gene3D Ribonuclease Inhibitor 563 774 IPR032675 -
Mal5g2650 1402 Gene3D Ribonuclease Inhibitor 775 1013 IPR032675 -
Mal5g2650 1402 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 152 IPR035897 -
Mal5g2650 1402 PANTHER TMV RESISTANCE PROTEIN N-LIKE 12 1297 - -
Mal5g2650 1402 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1297 IPR044974 GO:0006952
Mal5g2650 1402 PRINTS Disease resistance protein signature 384 398 - -
Mal5g2650 1402 PRINTS Disease resistance protein signature 212 227 - -
Mal5g2650 1402 PRINTS Disease resistance protein signature 901 917 - -
Mal5g2650 1402 PRINTS Disease resistance protein signature 291 305 - -
Mal5g2650 1402 SMART LRR_typ_2 880 903 IPR003591 -
Mal5g2650 1402 SMART LRR_typ_2 1055 1077 IPR003591 -
Mal5g2650 1402 SMART LRR_typ_2 833 856 IPR003591 -
Mal5g2650 1402 SMART LRR_typ_2 786 809 IPR003591 -
Mal5g2650 1402 SMART LRR_typ_2 739 762 IPR003591 -
Mal5g2650 1402 SMART LRR_typ_2 927 950 IPR003591 -
Mal5g2650 1402 Gene3D - 178 342 IPR027417 -
Mal5g2650 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 444 IPR027417 -
Mal5g2650 1402 Pfam TIR domain 15 181 IPR000157 GO:0007165
Mal5g2650 1402 Gene3D - 13 177 IPR035897 -
Mal5g2650 1402 SUPERFAMILY L domain-like 492 936 - -
Mal5g2650 1402 SUPERFAMILY L domain-like 896 1201 - -
Mal5g2650 1402 Gene3D - 349 434 IPR042197 -
Mal5g2650 1402 ProSiteProfiles TIR domain profile. 13 175 IPR000157 GO:0007165
Mal5g2650 1402 SMART till_3 14 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2650 Mal-Chr5 77233259 77240262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2650 15 862 WRKY Transcription Factor Family AT4G12020 29.296 3.00e-74 271