Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2649 ATGAAGCAATTCGTTATCAGTTCAGAAACTGATGCAATCAGAGAAGTTCAAGACAGGGGTGATCAAGTGGAAATTGCACGATTTATTAAAGAAGAAGTGAAAAAAGAGCTGAAGAAAAGCCTTGAGGAAGCACAAAGCTATTTTCACACTGTATCTGGACCAAAATTGGCACTAGTAATTGATGGAAAGTGTCTAATGTATGCATTGGATCCAACTTTAAGGGTGATGTTGCTCAATCTTAGTTTGAATTGTCATGCGGTTGTTTGCTGCCGGGTTTCTCCCTTACGAAAAGCACAGGTCACAAGTATGGTCAAGAAAGGTGCCAAGAAAATAACGCTTAGTATTGGTGATGGAGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGAATGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAGTTCCGTTACCTTGAAGATTTGCTTCTTGTTCATGGCCGCTGGTCATATCTGCGAATATGCAAGGTGGTGATATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAAAGGTTCTACGATGATTGGTTTCAGTCTTTATATAATGTTATTTTCACAGCGCTGCCTGTGATCATAGTTGGATTATTTGACAAGGATGTTAGTGCATCTCTATCCAAGAAGTATCCCGAATTGTACATGGAAGGCATTAGAAATGTTTTCTTCAAATGGAAAGTCGTGGCTATATGGGCCTTTTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTACAACAAATTTAAGTGCAAAAAATTCAGATGGCAAGACATTTGGACTCTGGGATGTCAGTACAATGGCATTCACTTGTGTTGTGGTAACCGTCAACTTGAGATTACTTTTGATTTGTAATTCAATCACAAGATGGCACTACATTAGTGTTGGTGGAAGCATATTAGCTTGGTTCATTTTTATTTTTTTATATTCAGGGATTACCACTCCTTATGATCGACAGGAGAATGTTTATTTTGTCATATATGTCTTGATGAGTACCGTCTATTTCTACCTAACACTACTACTTGTTCCCGTTGCTGCACTTTTCTGTGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCATATGTTTATCAGATTGTTCAAGAAATCAATAATCTTTACATAGCGGTTAGGAGAATTCCCTGTAGATCGGTCGATTTTGAAGAAAATAGCTTCTGCCATCTGTAA 1284 0.3801 MKQFVISSETDAIREVQDRGDQVEIARFIKEEVKKELKKSLEEAQSYFHTVSGPKLALVIDGKCLMYALDPTLRVMLLNLSLNCHAVVCCRVSPLRKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNSDGKTFGLWDVSTMAFTCVVVTVNLRLLLICNSITRWHYISVGGSILAWFIFIFLYSGITTPYDRQENVYFVIYVLMSTVYFYLTLLLVPVAALFCDFVYQGVQRWFFPYVYQIVQEINNLYIAVRRIPCRSVDFEENSFCHL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2649 427 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 88 194 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal5g2649 427 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 410 - -
Mal5g2649 427 SUPERFAMILY HAD-like 21 162 IPR036412 -
Mal5g2649 427 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 1 401 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mal5g2649 427 Pfam Phospholipid-translocating P-type ATPase C-terminal 143 393 IPR032630 -
Mal5g2649 427 Gene3D - 5 155 IPR023214 -
Mal5g2649 427 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 410 - -
Mal5g2649 427 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 393 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2649 Mal-Chr5 77217169 77219360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2649 1 403 Primary Pumps ATPases AT1G59820 80.893 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2649 K14802 - gmx:100815547 739.569