Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2647 ATGGAGATAAATGAAGGTCAACCAATTGAAACTGATGGGCCCAAAGATATTTTTCTTGGTCAAGTTGTAAATAGCAAAGATGAAGCTTATGATTTATACCAAGAGCATGCCTTCAAAACGGGTTTTAGTGTAAGAAAGGGGAAGGAGTTATATTACGATAATGAGAAAAAGAGTACACGTTTGAAAGAGTTTTATTGTTCCAAACAAGGGTTTAAGAACAATGAACCTGATGGTGAAGTGGCTTATAAAAGAGCAGATTCAAGAACAAATTGCTTAGCTATGGTGAGATTTAATGTGACCAAGGAAGGAGTGTGGAAAGTTACAAAGTTGATATTGGAACACAATCATGAATTTGTACCACTTCAGCAAAGGTATTTGTTACGTTCTATGAGAAATATGTCAAATCTCAAAGAAGACCGCATAAAGTCTTTGGTGAATGATGCTATTAGAGTTACAAATATTGGTAGTTATTTAGGGAAAGAAGTTGGTGGAGTTGACAAATGTGGTGTGATGTTGAAAGATATGCATAATTATGTCTCCACTGGAAAGTTGAAATTTATTGAAGCCAGAGATGCTCAATCTTTAGTGAATCACTTACAAAGTAGACAAGCACAAGATTCCATGTTCTATTACAGTGTACAGTTAGACCATGAATCACGTTTGACCAATGTCTTCTGGAGAGATGGTAAATCTGTTATTGATTATGACTGTTTTGGGGATGTTGTGATTTTTGATACTACGCATCGTACTAATAAATACAACTTGATTTGTGCCCCCTTTGTTGGTGTAAATCATCACTGGCAAAATGTCATGTTTGGTTGTGCCTTGTTATTTGATGAAAGTGAAGTTTCTTTTGCTTGGTTGTTCAAAGCGTTTTTGGAGAGTATGGGAAACCAACAACCAAAAACAATCGTTACAGCTCATGATCCAACCATGGCTAAAGCGATTGGAGAGGTAATGCCAAATGCATGTCATCGTTTCTGTTTATGGCACATAGCTAAGAATGCTCCTTCACATTTGGGTTCTCTTATTTCTGATCAAAAGTTTCAAAGCTTATTTAGTAAATGCATGGAAGGTTGTGATTCAGAAGAAGAATTTCAAAGAACTTGGGATGAGATGATGAATGTGTATAAGCTTCAAGATCATCAATGGTTGAGCAATATGTATGAAATTCGCCATAAGTGGAGCACTGCTTATAGCAAGAATGTGTTCTCTGCTGGTATCAAGTCATGCCGAAGGATTGAGAGTACAAACAATGTGTTGGATGAGATTAGAGGGAAAACAACAACTCTCACACAATTTTTAGTGGCATTTGAGAAGATGTTGAAAAAATGGCACCGCTTAGAGGTTGAGGAGGAATTCAAAAACAACCAAAGCACACCTCCTCTTGTTATAAATATTAGTGAAACATTACGGCATGCATCTACGGTATATACTCACAAAGTCTTCAATATTTTTCTAAATGAGTATCTTGAAGGAACAGGTGGAAGCACTTCTATAGAGATTAGTCAATCTAATAATGTGTCAAATCATGAAGTCATGTTGAACCAAAAGCCTAATAAAAAATATACGGTGACATTTGACTCTTCCAATATGAAGATCAATTGTAGTTGCCGCAAGTTTGATTCAATGGGCATTCTTTGTAGTCATGCTTTGCGGATTTATAACATTAAAGGTATTTTAAGAATACCTGACCAATACTTCTTAAAAAGATGGTCAAAAAATGCAAGGTCCGTGATTTATGAGCACATAGCTAGGGGCATTGGAGAAGATTCTACCTCCAATTCAGTGATCAATGATGATGATGCCAGTATTCTTTATCGCAATGCTATTATGAAGTCATTCTACTATCTAGTTTTGGAAAGTCAAGACAGCAAAGAAGCTCAAAATATTATGTGGAAATTACTTGATATTGGAGTTGAGAGGGTGCAAAAAGGTGTTGGCAAGGCCAATTTAAATTCAAATGTAGATACAATGGAGACAAATTTCAATGAAAATGAGGAAACATGCTTCACACCAATGGTCTGA 2028 0.3595 MEINEGQPIETDGPKDIFLGQVVNSKDEAYDLYQEHAFKTGFSVRKGKELYYDNEKKSTRLKEFYCSKQGFKNNEPDGEVAYKRADSRTNCLAMVRFNVTKEGVWKVTKLILEHNHEFVPLQQRYLLRSMRNMSNLKEDRIKSLVNDAIRVTNIGSYLGKEVGGVDKCGVMLKDMHNYVSTGKLKFIEARDAQSLVNHLQSRQAQDSMFYYSVQLDHESRLTNVFWRDGKSVIDYDCFGDVVIFDTTHRTNKYNLICAPFVGVNHHWQNVMFGCALLFDESEVSFAWLFKAFLESMGNQQPKTIVTAHDPTMAKAIGEVMPNACHRFCLWHIAKNAPSHLGSLISDQKFQSLFSKCMEGCDSEEEFQRTWDEMMNVYKLQDHQWLSNMYEIRHKWSTAYSKNVFSAGIKSCRRIESTNNVLDEIRGKTTTLTQFLVAFEKMLKKWHRLEVEEEFKNNQSTPPLVINISETLRHASTVYTHKVFNIFLNEYLEGTGGSTSIEISQSNNVSNHEVMLNQKPNKKYTVTFDSSNMKINCSCRKFDSMGILCSHALRIYNIKGILRIPDQYFLKRWSKNARSVIYEHIARGIGEDSTSNSVINDDDASILYRNAIMKSFYYLVLESQDSKEAQNIMWKLLDIGVERVQKGVGKANLNSNVDTMETNFNENEETCFTPMV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2647 675 Coils Coil 649 669 - -
Mal5g2647 675 ProSiteProfiles Zinc finger SWIM-type profile. 523 559 IPR007527 GO:0008270
Mal5g2647 675 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 660 IPR031052 GO:0006355
Mal5g2647 675 PANTHER OS12G0160900 PROTEIN 18 660 - -
Mal5g2647 675 Pfam MULE transposase domain 241 335 IPR018289 -
Mal5g2647 675 Pfam SWIM zinc finger 523 554 IPR007527 GO:0008270
Mal5g2647 675 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
Mal5g2647 675 SMART 26again6 534 561 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2647 Mal-Chr5 77192786 77194813 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g2647 MULE 7.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2647 - - lja:Lj4g3v2120630.1 981.089