Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2608 ATGGTTAATATATTATCTAATCTCTTTCTCTTTACGCTCTCACTGCATTGTTTTGTGGCTTGCTTAGTTGCGAATACAAAAAACATCACCACAGATCAATCTGCTCTTCTAGCATTCAAATCACTAATTACTTCAGACCCTTATGATACATTGGCTAATAATTGGTCAACCTCCTCTTCTGTCTGCAGTTGGGTTGGTGTTACTTGTGATGAGAAACATGGTAGAGTCCACAGTTTGATTCTCCGAAACATGAGTCTTAGAGGTACTATTTCCCCAAACTTGGAGAATTTGTCCTTCCTTGTTATACTTGACCTCAAAAACAATAGCTTCGGTGGTCAGTTTCCTATAGAGTTATGGGCAATTCCTGCAGCATTGGGGAACTTATCGCAACTTCAATATTTGTATCTTGGCGCTAACAATTTTAGCGGTTTTATCCCCCAATCTATTGGTAACCTTCGTCGGTTGAAAGTAATGGAAATTGGTAACAAGTTGTCTGGACCCATACCTCAAACAATTGCCAACTTGTCTTCACTTGAATATATTAGTTTATTTTATAACTACTTATCAGGTAAAATTCCATCGCTTAACAACATGACTTCTTTGAGGGTGTTTAAATTTGGCTATAACAATTTAAATGGAAGTCTACCAAATGACTTTTTCAATCAGCTTCCTCAACTTGAAAAATTTACATTATCCAACAATCAATTTGATGGAAGCATTCCACAATCAATCGGTAACTGCACATCTCTACTGAACATTCATCTATCATCGAACTTTTTCACAGGCACGATTCCCGAGGAGATTGGCTATCTTGTTCAACTTGAGTATCTACTATTGGAAAACAATACTTTTAGTGGATCTATTCCTTCAAAACTCCTCAACATATCATCACTGATAATATTGGATCTTCCAGTAAATAATCTATCGGGGATAATTCCATCAAATACAGGATATAGCCTTCCTAACCTGCAATATCTATCATTGTATCTAAACAATTTTGTTGGAAATATTCCAAATTATATATTCAATGCTTCTAAACTCCGTCAAATTCAATTGCACCAAAACGCATTCAGTGGAATTGTTCCCAATGTTATTGGAAATTTAAGGTTCCTTGATATGTTTTACACACACGACAACAATTTGACAATAGAAGATTCTCATCAATTCTTTACTTCCTTGTCAAATTGTAGATATTTGAAATATCTAGACTTATCAGGGAATCGTATACTACCTAATCTTCCTAAGTCAATTGGAAACATAACTTCAGAATTCTTCTGGGCAAACTCATGTGGAATTGATGGTAATATTCCCGTAGAAGTTGGAAACATGAGCAACTTGCTAACTTTGTATCTGTATGACAATAATATAAATGGACCAATACCACGTTCACTCAAAGGGTTACATAAACTTCAAAGATTGTCTCTTGCCTACAATGGACTCCAAGGATCATTTATTGAGGAGCTTTGTGTAATTAAGAGTTTGGGTGAGTTGTATCTATTTGGTAATAAGCTTTCTGGAGTTTTACCAACATGTTTGGGAAATATGACTTCTCTTATAAAGTTATACATAGGATCTAACAGTTTGAACTCTATGATACCTTCCTCTTTTTGGAGTCTCAAAGATATCTTAGTGGTAGATATGTCCTCTAATAATTTCATTGGTAATCTTCCACCTGAAATTGGGAATTTGAAAGCAATTATACTATTAAATCTATCAAGAAATCATTTTTCAGGCAACATTCCTACAACCATCAGCTCCTTGCAAAATTTGCAGAATCTCTCCTTAGCTCATAACAAAATGTATGGATCAATTCCCACATCACTTGATAAAATGATAAGCTTGATCTTCTTGGACTTGTCTCAAAATATGTTAAGTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTACCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGCGGAGCTTTCAAGAATTTCACAGCTCAATCTTTTATGCATAATGAAGCACTTTGCGGAAATCCTCGCTTCCAAGTACCTGCATGTGGTAAGCAAGTTAAAAAAATGTCAATGGCAAAGAAGATATTACTCAAATTCATACTTCCCATAGTTGTGTCAACCATTTTAGTTGTTGCATGCATCATATGTTTTAGACTCAAAAAGAAAAATGTTGAAAATTCTTTTGAAAGAGGTTTAGGAGCTCCAAGAAGAATATCATATTACGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGCAAATTACTTGGAAGGGGAAGCTTTGGCTCTGTGTATCAGGGGGAGCTTCTTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGACAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGCAGTTGCTCAAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTGCATCATGGTTCTTCAATACCTGTGGTTCATTGCGATTTGAAGCCTTCTAATGTCTTGTTAGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTAAAACTCATACACAAACTTTGGCTACTATTGGGTATCTTGCACCAGAGTATGGATCTAAGGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGTTAATGGAAATCTTCACAAGGAGAAAGCCAACAGATGATATGTTTATTGCTGAACTAAGTTTGAAAACATGGATCAGTGGATCATTGCCTAATTCAATTTTGGAGGTCTTGGATTCAAATTTAGTCCAACAAATTGGGGAACAGATTGATGATATATTGATTCACATGTCATCCATTTTTGGTTTAGCTCTGAATTGTTGCGAATATTCACCTGAAGCTAGAATTGATATGGCAGATGTTATTGCGTCGCTAATCAAAATCAGGACTTTGGTTCTTGGCGCAAACACAGTCTAG 3111 0.3533 MVNILSNLFLFTLSLHCFVACLVANTKNITTDQSALLAFKSLITSDPYDTLANNWSTSSSVCSWVGVTCDEKHGRVHSLILRNMSLRGTISPNLENLSFLVILDLKNNSFGGQFPIELWAIPAALGNLSQLQYLYLGANNFSGFIPQSIGNLRRLKVMEIGNKLSGPIPQTIANLSSLEYISLFYNYLSGKIPSLNNMTSLRVFKFGYNNLNGSLPNDFFNQLPQLEKFTLSNNQFDGSIPQSIGNCTSLLNIHLSSNFFTGTIPEEIGYLVQLEYLLLENNTFSGSIPSKLLNISSLIILDLPVNNLSGIIPSNTGYSLPNLQYLSLYLNNFVGNIPNYIFNASKLRQIQLHQNAFSGIVPNVIGNLRFLDMFYTHDNNLTIEDSHQFFTSLSNCRYLKYLDLSGNRILPNLPKSIGNITSEFFWANSCGIDGNIPVEVGNMSNLLTLYLYDNNINGPIPRSLKGLHKLQRLSLAYNGLQGSFIEELCVIKSLGELYLFGNKLSGVLPTCLGNMTSLIKLYIGSNSLNSMIPSSFWSLKDILVVDMSSNNFIGNLPPEIGNLKAIILLNLSRNHFSGNIPTTISSLQNLQNLSLAHNKMYGSIPTSLDKMISLIFLDLSQNMLSGVIPKSLESLLYLQNINFSYNRLQGEIPDGGAFKNFTAQSFMHNEALCGNPRFQVPACGKQVKKMSMAKKILLKFILPIVVSTILVVACIICFRLKKKNVENSFERGLGAPRRISYYELVQATNGFNESKLLGRGSFGSVYQGELLDGEMIAVKVIDLQSETKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKALVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFIAELSLKTWISGSLPNSILEVLDSNLVQQIGEQIDDILIHMSSIFGLALNCCEYSPEARIDMADVIASLIKIRTLVLGANTV* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2608 1036 ProSiteProfiles Protein kinase domain profile. 751 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2608 1036 Gene3D Phosphorylase Kinase; domain 1 734 826 - -
Mal5g2608 1036 SUPERFAMILY L domain-like 428 676 - -
Mal5g2608 1036 Gene3D Transferase(Phosphotransferase) domain 1 827 1030 - -
Mal5g2608 1036 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 126 266 - -
Mal5g2608 1036 SUPERFAMILY Protein kinase-like (PK-like) 734 1023 IPR011009 -
Mal5g2608 1036 SMART serkin_6 751 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2608 1036 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 126 266 - -
Mal5g2608 1036 Pfam Protein kinase domain 752 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2608 1036 Gene3D Ribonuclease Inhibitor 318 415 IPR032675 -
Mal5g2608 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672|GO:0006468
Mal5g2608 1036 SUPERFAMILY L domain-like 43 420 - -
Mal5g2608 1036 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 225 1030 - -
Mal5g2608 1036 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 118 - -
Mal5g2608 1036 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mal5g2608 1036 SMART LRR_typ_2 271 295 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 611 634 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 320 344 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 198 222 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 223 247 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 515 538 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 128 152 IPR003591 -
Mal5g2608 1036 SMART LRR_typ_2 491 514 IPR003591 -
Mal5g2608 1036 Gene3D Ribonuclease Inhibitor 160 317 IPR032675 -
Mal5g2608 1036 Gene3D Ribonuclease Inhibitor 421 684 IPR032675 -
Mal5g2608 1036 Gene3D Ribonuclease Inhibitor 31 151 IPR032675 -
Mal5g2608 1036 ProSitePatterns Protein kinases ATP-binding region signature. 757 779 IPR017441 GO:0005524
Mal5g2608 1036 Pfam Leucine rich repeat 493 552 IPR001611 GO:0005515
Mal5g2608 1036 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 225 1030 - -
Mal5g2608 1036 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 13 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2608 Mal-Chr5 76354654 76363201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2608 31 1027 Receptor kinase-like Gene Family AT3G47570 37.801 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal5g2608 Pkinase 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2608 - K13420 mtr:MTR_8g465340 1424.84