Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2589 ATGAAAATGGGGTTAGGTGGTGATAATGGTAAGGTGATAGAGTCTTTGGATGTGTGTAAATCAAAAGGGTGGAAAAAGAAGAAGAAACAAGATGGGGTTATGGAAGATGAAGAAACTGAAACTGGGTGTTGGCTTAGTTTTAGGTTCATTGGAAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCTGTTAGTGGCACCAGTACTAATTATGCTGAAAGCAAATCAACTATTGATACAAGTAGAGACCAACCATCAGTTCCAGTAGTCTCTTCAACAACCACTACTACTAGTAATGCTGAAAGCAACTCATCTACTTCAAAAATAGAAGATGAGATTAAAGTTGCTTCCAGGCTGCGGAAATTCTCTTTCAATGATCTTAAATTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTGTTCAAAGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGACTTACTGTTGCTGTCAAAACCCTTAACCACGATGGTCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTTGGTGATTTAGTTCATCAAAACCTTGTCAAACTTATAGGCTACTGTATCGAAGATGATCAAAGGTTGCTTGTATATGAGTTTATGCCTCGAGGAAGCTTGGAAAACCACTTGTTTAGGAGATCATTGCCTCTTCCGTGGTCCATTAGGATGAAAATTGCGCTAGGAGCTGCAAAGGGGCTTGCTTTTCTTCATGAGGAAGCCGAACGGCCAGTAATATACAGGGATTTCAAAACTTCAAATATACTATTGGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACTCATGTGTCTACTCGAGTTATGGGAACTTATGGTTATGCAGCACCAGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGATGTGTATAGTTTCGGAGTGGTACTACTTGAGATGATAACCGGGCGAAGATCCATGGACAAAAACCGACCAAATGGCGAACATAACCTTGTGGAATGGGCTAGACCGCATCTAGGAGAGAGACGACGGTTCTACAGGTTGATAGACCCTCGGTTAGAAGGTCACTTCTCAATAAAAGGAGCTCAAAAAGCTGCGCATTTGGCTGCTCACTGCCTTAGCCGAGATCCAAAAGCCAGACCACTAATGAGTGAAGTTGTAGAAGCCTTGAAGCCTCTCCCAAACCTTAAGGACATGGCTAGTTCATCGTACTATTTCCAGACAATGCAAGCCGACCGATTTAGTGCAAGTCCAAATACTCGAAATGGTAGAACACAAGGAGCATTTGCACGGAACGGCCAACAAAGGAGCCTTTCCATATCGCATGGTACTCAGGCATCTCCATTTCACCATCAGTATCCTCAACAGTCACCAAAACCAAGTGGAAAGGCACAAAGTTGA 1473 0.4284 MKMGLGGDNGKVIESLDVCKSKGWKKKKKQDGVMEDEETETGCWLSFRFIGSCISSRSKVDSSVSGTSTNYAESKSTIDTSRDQPSVPVVSSTTTTTSNAESNSSTSKIEDEIKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGAFARNGQQRSLSISHGTQASPFHHQYPQQSPKPSGKAQS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2589 490 MobiDBLite consensus disorder prediction 58 107 - -
Mal5g2589 490 Pfam Protein tyrosine and serine/threonine kinase 138 414 IPR001245 GO:0004672|GO:0006468
Mal5g2589 490 PANTHER OS01G0588500 PROTEIN-RELATED 71 478 - -
Mal5g2589 490 SUPERFAMILY Protein kinase-like (PK-like) 120 437 IPR011009 -
Mal5g2589 490 CDD STKc_IRAK 140 417 - -
Mal5g2589 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mal5g2589 490 Gene3D Transferase(Phosphotransferase) domain 1 220 436 - -
Mal5g2589 490 MobiDBLite consensus disorder prediction 58 106 - -
Mal5g2589 490 ProSitePatterns Protein kinases ATP-binding region signature. 140 172 IPR017441 GO:0005524
Mal5g2589 490 MobiDBLite consensus disorder prediction 439 490 - -
Mal5g2589 490 Gene3D Phosphorylase Kinase; domain 1 108 219 - -
Mal5g2589 490 ProSiteProfiles Protein kinase domain profile. 134 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2589 490 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 71 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2589 Mal-Chr5 75709477 75712563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2589 79 414 Glycoside Hydrolase AT3G07070 53.982 5.65e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g2589 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2589 - - gmx:100787127 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2589 5 75709477 75712563 Mal5g2589 5 75709477 75712563 ECH