Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2583 ATGGAGAGAGCATTTGATTCATTGTCTGATGTTGTTCCGGGAAGGGATACATGGACGATAAAGGTTCGAGTGGTTCAAATTTGGGAGGTCCCAACTTTTCTGAATCCTCAACAGGGTAACTCTCTTGAGTTGGTTTTAGTTGATGAAAAGGGTTCTAAGATTCATGCTACCGTCCGGAAACAACTTATGTACTTATTCGAGAAGAAATTAATTGAAGGAGAGGTGTATAAGATGTCTTATTTTGCTGTTGCTCCAGCCTTTGGATCATACCGTACCACGCTTCATCCTTGCAAGCTTTTGTTCCAGATGAAAACTAAGGTTCAGTCATGTGTGAGTCAGCTCATTCCAATGTATGGATTAAGCTTTACTGATATTGCCCAAGTGTGCAGCCATACTGTTGATTATAAACACTTATTTGGTGAGGAATCTATTCTACATTAG 441 0.3991 MERAFDSLSDVVPGRDTWTIKVRVVQIWEVPTFLNPQQGNSLELVLVDEKGSKIHATVRKQLMYLFEKKLIEGEVYKMSYFAVAPAFGSYRTTLHPCKLLFQMKTKVQSCVSQLIPMYGLSFTDIAQVCSHTVDYKHLFGEESILH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2583 146 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
Mal5g2583 146 Gene3D - 3 110 IPR012340 -
Mal5g2583 146 CDD RPA1_DBD_A_like 19 107 - -
Mal5g2583 146 Pfam Domain of unknown function DUF223 43 135 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2583 Mal-Chr5 75472162 75472799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2583 13 128 Core DNA Replication Machinery Family AT5G45400 27.119 3.10e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2583 - - mtr:MTR_8g062030 184.882